Gene : PGSC0003DMG400000417 S. tuberosum v4.03
Defline:  (1 of 1) PTHR10003//PTHR10003:SF34 - SUPEROXIDE DISMUTASE CU-ZN -RELATED // SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  1869
Name:  ? PGSC0003DMG400000417 Secondary Identifier:  ? PAC:37467502
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum DETOX1-PWY Solanum tuberosum pathologic  
Stuberosum DETOX1-PWY-1 Solanum tuberosum pathologic  
Stuberosum PWY-6854 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400000417 0.5kb upstream 0.5kb upstream 6447 true ST4.03ch11: 39216875-39223321 Solanum tuberosum
PGSC0003DMG400000417 0.5kb upstream 0.5kb upstream 500 false ST4.03ch11: 39216875-39217374 Solanum tuberosum
PGSC0003DMG400000417 0.5kb downstream 0.5kb downstream 6447 true ST4.03ch11: 39217375-39223821 Solanum tuberosum
PGSC0003DMG400000417 0.5kb downstream 0.5kb downstream 500 false ST4.03ch11: 39223322-39223821 Solanum tuberosum
PGSC0003DMG400000417 1.0kb upstream 1.0kb upstream 6947 true ST4.03ch11: 39216375-39223321 Solanum tuberosum
PGSC0003DMG400000417 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch11: 39216375-39217374 Solanum tuberosum
PGSC0003DMG400000417 1.0kb downstream 1.0kb downstream 6947 true ST4.03ch11: 39217375-39224321 Solanum tuberosum
PGSC0003DMG400000417 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch11: 39223322-39224321 Solanum tuberosum
PGSC0003DMG400000417 2.0kb upstream 2.0kb upstream 7947 true ST4.03ch11: 39215375-39223321 Solanum tuberosum
PGSC0003DMG400000417 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch11: 39215375-39217374 Solanum tuberosum
PGSC0003DMG400000417 2.0kb downstream 2.0kb downstream 7947 true ST4.03ch11: 39217375-39225321 Solanum tuberosum
PGSC0003DMG400000417 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch11: 39223322-39225321 Solanum tuberosum
PGSC0003DMG400000417 5.0kb upstream 5.0kb upstream 10947 true ST4.03ch11: 39212375-39223321 Solanum tuberosum
PGSC0003DMG400000417 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch11: 39212375-39217374 Solanum tuberosum
PGSC0003DMG400000417 5.0kb downstream 5.0kb downstream 10947 true ST4.03ch11: 39217375-39228321 Solanum tuberosum
PGSC0003DMG400000417 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch11: 39223322-39228321 Solanum tuberosum
PGSC0003DMG400000417 10.0kb upstream 10.0kb upstream 15947 true ST4.03ch11: 39207375-39223321 Solanum tuberosum
PGSC0003DMG400000417 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch11: 39207375-39217374 Solanum tuberosum
PGSC0003DMG400000417 10.0kb downstream 10.0kb downstream 15947 true ST4.03ch11: 39217375-39233321 Solanum tuberosum
PGSC0003DMG400000417 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch11: 39223322-39233321 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467710 5263 Asterids View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain