Gene : PGSC0003DMG400007434 S. tuberosum v4.03

Defline:  (1 of 1) 5.4.99.22 - 23S rRNA pseudouridine(2605) synthase Genomic Order:  381
Name:  ? PGSC0003DMG400007434 Secondary Identifier:  ? PAC:37467020

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400007434 0.5kb upstream 0.5kb upstream 5679 true ST4.03ch11: 3692111-3697789 Solanum tuberosum
PGSC0003DMG400007434 0.5kb upstream 0.5kb upstream 500 false ST4.03ch11: 3692111-3692610 Solanum tuberosum
PGSC0003DMG400007434 0.5kb downstream 0.5kb downstream 5679 true ST4.03ch11: 3692611-3698289 Solanum tuberosum
PGSC0003DMG400007434 0.5kb downstream 0.5kb downstream 500 false ST4.03ch11: 3697790-3698289 Solanum tuberosum
PGSC0003DMG400007434 1.0kb upstream 1.0kb upstream 6179 true ST4.03ch11: 3691611-3697789 Solanum tuberosum
PGSC0003DMG400007434 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch11: 3691611-3692610 Solanum tuberosum
PGSC0003DMG400007434 1.0kb downstream 1.0kb downstream 6179 true ST4.03ch11: 3692611-3698789 Solanum tuberosum
PGSC0003DMG400007434 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch11: 3697790-3698789 Solanum tuberosum
PGSC0003DMG400007434 2.0kb upstream 2.0kb upstream 7179 true ST4.03ch11: 3690611-3697789 Solanum tuberosum
PGSC0003DMG400007434 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch11: 3690611-3692610 Solanum tuberosum
PGSC0003DMG400007434 2.0kb downstream 2.0kb downstream 7179 true ST4.03ch11: 3692611-3699789 Solanum tuberosum
PGSC0003DMG400007434 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch11: 3697790-3699789 Solanum tuberosum
PGSC0003DMG400007434 5.0kb upstream 5.0kb upstream 10179 true ST4.03ch11: 3687611-3697789 Solanum tuberosum
PGSC0003DMG400007434 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch11: 3687611-3692610 Solanum tuberosum
PGSC0003DMG400007434 5.0kb downstream 5.0kb downstream 10179 true ST4.03ch11: 3692611-3702789 Solanum tuberosum
PGSC0003DMG400007434 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch11: 3697790-3702789 Solanum tuberosum
PGSC0003DMG400007434 10.0kb upstream 10.0kb upstream 15179 true ST4.03ch11: 3682611-3697789 Solanum tuberosum
PGSC0003DMG400007434 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch11: 3682611-3692610 Solanum tuberosum
PGSC0003DMG400007434 10.0kb downstream 10.0kb downstream 15179 true ST4.03ch11: 3692611-3707789 Solanum tuberosum
PGSC0003DMG400007434 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch11: 3697790-3707789 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466322 5263 Asterids View MSA
123747131 5271 Pentapetalae View MSA
122791737 5272 Eudicot View MSA
122046867 5273 Angiosperm View MSA
121350601 5274 Embryophyte View MSA
123427017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain