Gene : PGSC0003DMG400000995 S. tuberosum v4.03

Defline:  (1 of 1) K11808 - phosphoribosylaminoimidazole carboxylase (ADE2) Genomic Order:  608
Name:  ? PGSC0003DMG400000995 Secondary Identifier:  ? PAC:37465735

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-6124 Solanum tuberosum pathologic  
Stuberosum PWY-841 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400000995 0.5kb upstream 0.5kb upstream 6481 true ST4.03ch11: 6280909-6287389 Solanum tuberosum
PGSC0003DMG400000995 0.5kb upstream 0.5kb upstream 500 false ST4.03ch11: 6286890-6287389 Solanum tuberosum
PGSC0003DMG400000995 0.5kb downstream 0.5kb downstream 6481 true ST4.03ch11: 6280409-6286889 Solanum tuberosum
PGSC0003DMG400000995 0.5kb downstream 0.5kb downstream 500 false ST4.03ch11: 6280409-6280908 Solanum tuberosum
PGSC0003DMG400000995 1.0kb upstream 1.0kb upstream 6981 true ST4.03ch11: 6280909-6287889 Solanum tuberosum
PGSC0003DMG400000995 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch11: 6286890-6287889 Solanum tuberosum
PGSC0003DMG400000995 1.0kb downstream 1.0kb downstream 6981 true ST4.03ch11: 6279909-6286889 Solanum tuberosum
PGSC0003DMG400000995 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch11: 6279909-6280908 Solanum tuberosum
PGSC0003DMG400000995 2.0kb upstream 2.0kb upstream 7981 true ST4.03ch11: 6280909-6288889 Solanum tuberosum
PGSC0003DMG400000995 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch11: 6286890-6288889 Solanum tuberosum
PGSC0003DMG400000995 2.0kb downstream 2.0kb downstream 7981 true ST4.03ch11: 6278909-6286889 Solanum tuberosum
PGSC0003DMG400000995 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch11: 6278909-6280908 Solanum tuberosum
PGSC0003DMG400000995 5.0kb upstream 5.0kb upstream 10981 true ST4.03ch11: 6280909-6291889 Solanum tuberosum
PGSC0003DMG400000995 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch11: 6286890-6291889 Solanum tuberosum
PGSC0003DMG400000995 5.0kb downstream 5.0kb downstream 10981 true ST4.03ch11: 6275909-6286889 Solanum tuberosum
PGSC0003DMG400000995 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch11: 6275909-6280908 Solanum tuberosum
PGSC0003DMG400000995 10.0kb upstream 10.0kb upstream 15981 true ST4.03ch11: 6280909-6296889 Solanum tuberosum
PGSC0003DMG400000995 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch11: 6286890-6296889 Solanum tuberosum
PGSC0003DMG400000995 10.0kb downstream 10.0kb downstream 15981 true ST4.03ch11: 6270909-6286889 Solanum tuberosum
PGSC0003DMG400000995 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch11: 6270909-6280908 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468469 5263 Asterids View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain