Gene : PGSC0003DMG400031250 S. tuberosum v4.03
Defline:  (1 of 1) PTHR10277//PTHR10277:SF40 - HOMOCITRATE SYNTHASE-RELATED // PROTEIN Y71G12B.10 Genomic Order:  1725
Name:  ? PGSC0003DMG400031250 Secondary Identifier:  ? PAC:37465016
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum LEU-DEG2-PWY Solanum tuberosum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400031250 0.5kb upstream 0.5kb upstream 4849 true ST4.03ch11: 36243527-36248375 Solanum tuberosum
PGSC0003DMG400031250 0.5kb upstream 0.5kb upstream 500 false ST4.03ch11: 36243527-36244026 Solanum tuberosum
PGSC0003DMG400031250 0.5kb downstream 0.5kb downstream 4849 true ST4.03ch11: 36244027-36248875 Solanum tuberosum
PGSC0003DMG400031250 0.5kb downstream 0.5kb downstream 500 false ST4.03ch11: 36248376-36248875 Solanum tuberosum
PGSC0003DMG400031250 1.0kb upstream 1.0kb upstream 5349 true ST4.03ch11: 36243027-36248375 Solanum tuberosum
PGSC0003DMG400031250 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch11: 36243027-36244026 Solanum tuberosum
PGSC0003DMG400031250 1.0kb downstream 1.0kb downstream 5349 true ST4.03ch11: 36244027-36249375 Solanum tuberosum
PGSC0003DMG400031250 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch11: 36248376-36249375 Solanum tuberosum
PGSC0003DMG400031250 2.0kb upstream 2.0kb upstream 6349 true ST4.03ch11: 36242027-36248375 Solanum tuberosum
PGSC0003DMG400031250 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch11: 36242027-36244026 Solanum tuberosum
PGSC0003DMG400031250 2.0kb downstream 2.0kb downstream 6349 true ST4.03ch11: 36244027-36250375 Solanum tuberosum
PGSC0003DMG400031250 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch11: 36248376-36250375 Solanum tuberosum
PGSC0003DMG400031250 5.0kb upstream 5.0kb upstream 9349 true ST4.03ch11: 36239027-36248375 Solanum tuberosum
PGSC0003DMG400031250 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch11: 36239027-36244026 Solanum tuberosum
PGSC0003DMG400031250 5.0kb downstream 5.0kb downstream 9349 true ST4.03ch11: 36244027-36253375 Solanum tuberosum
PGSC0003DMG400031250 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch11: 36248376-36253375 Solanum tuberosum
PGSC0003DMG400031250 10.0kb upstream 10.0kb upstream 14349 true ST4.03ch11: 36234027-36248375 Solanum tuberosum
PGSC0003DMG400031250 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch11: 36234027-36244026 Solanum tuberosum
PGSC0003DMG400031250 10.0kb downstream 10.0kb downstream 14349 true ST4.03ch11: 36244027-36258375 Solanum tuberosum
PGSC0003DMG400031250 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch11: 36248376-36258375 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472143 5263 Asterids View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain