Gene : PGSC0003DMG400016249 S. tuberosum v4.03
Defline:  (1 of 1) PTHR31642//PTHR31642:SF40 - FAMILY NOT NAMED // DUAL TRANSCRIPTION UNIT AND ALTERNATIVE SPLICING PROTEIN GLAUCE Genomic Order:  348
Name:  ? PGSC0003DMG400016249 Secondary Identifier:  ? PAC:37465961
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-7120 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400016249 0.5kb upstream 0.5kb upstream 3773 true ST4.03ch11: 3252401-3256173 Solanum tuberosum
PGSC0003DMG400016249 0.5kb upstream 0.5kb upstream 500 false ST4.03ch11: 3255674-3256173 Solanum tuberosum
PGSC0003DMG400016249 0.5kb downstream 0.5kb downstream 3773 true ST4.03ch11: 3251901-3255673 Solanum tuberosum
PGSC0003DMG400016249 0.5kb downstream 0.5kb downstream 500 false ST4.03ch11: 3251901-3252400 Solanum tuberosum
PGSC0003DMG400016249 1.0kb upstream 1.0kb upstream 4273 true ST4.03ch11: 3252401-3256673 Solanum tuberosum
PGSC0003DMG400016249 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch11: 3255674-3256673 Solanum tuberosum
PGSC0003DMG400016249 1.0kb downstream 1.0kb downstream 4273 true ST4.03ch11: 3251401-3255673 Solanum tuberosum
PGSC0003DMG400016249 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch11: 3251401-3252400 Solanum tuberosum
PGSC0003DMG400016249 2.0kb upstream 2.0kb upstream 5273 true ST4.03ch11: 3252401-3257673 Solanum tuberosum
PGSC0003DMG400016249 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch11: 3255674-3257673 Solanum tuberosum
PGSC0003DMG400016249 2.0kb downstream 2.0kb downstream 5273 true ST4.03ch11: 3250401-3255673 Solanum tuberosum
PGSC0003DMG400016249 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch11: 3250401-3252400 Solanum tuberosum
PGSC0003DMG400016249 5.0kb upstream 5.0kb upstream 8273 true ST4.03ch11: 3252401-3260673 Solanum tuberosum
PGSC0003DMG400016249 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch11: 3255674-3260673 Solanum tuberosum
PGSC0003DMG400016249 5.0kb downstream 5.0kb downstream 8273 true ST4.03ch11: 3247401-3255673 Solanum tuberosum
PGSC0003DMG400016249 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch11: 3247401-3252400 Solanum tuberosum
PGSC0003DMG400016249 10.0kb upstream 10.0kb upstream 13273 true ST4.03ch11: 3252401-3265673 Solanum tuberosum
PGSC0003DMG400016249 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch11: 3255674-3265673 Solanum tuberosum
PGSC0003DMG400016249 10.0kb downstream 10.0kb downstream 13273 true ST4.03ch11: 3242401-3255673 Solanum tuberosum
PGSC0003DMG400016249 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch11: 3242401-3252400 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476773 5263 Asterids View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain