Gene : PGSC0003DMG402028027 S. tuberosum v4.03
Defline:  (1 of 1) PTHR10683//PTHR10683:SF6 - TRANSALDOLASE // TRANSALDOLASE-RELATED Genomic Order:  1205
Name:  ? PGSC0003DMG402028027 Secondary Identifier:  ? PAC:37464584
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum NONOXIPENT-PWY Solanum tuberosum pathologic  
Stuberosum PENTOSE-P-PWY Solanum tuberosum pathologic  
Stuberosum PWY-5723 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG402028027 0.5kb upstream 0.5kb upstream 3774 true ST4.03ch11: 19466673-19470446 Solanum tuberosum
PGSC0003DMG402028027 0.5kb upstream 0.5kb upstream 500 false ST4.03ch11: 19469947-19470446 Solanum tuberosum
PGSC0003DMG402028027 0.5kb downstream 0.5kb downstream 3774 true ST4.03ch11: 19466173-19469946 Solanum tuberosum
PGSC0003DMG402028027 0.5kb downstream 0.5kb downstream 500 false ST4.03ch11: 19466173-19466672 Solanum tuberosum
PGSC0003DMG402028027 1.0kb upstream 1.0kb upstream 4274 true ST4.03ch11: 19466673-19470946 Solanum tuberosum
PGSC0003DMG402028027 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch11: 19469947-19470946 Solanum tuberosum
PGSC0003DMG402028027 1.0kb downstream 1.0kb downstream 4274 true ST4.03ch11: 19465673-19469946 Solanum tuberosum
PGSC0003DMG402028027 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch11: 19465673-19466672 Solanum tuberosum
PGSC0003DMG402028027 2.0kb upstream 2.0kb upstream 5274 true ST4.03ch11: 19466673-19471946 Solanum tuberosum
PGSC0003DMG402028027 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch11: 19469947-19471946 Solanum tuberosum
PGSC0003DMG402028027 2.0kb downstream 2.0kb downstream 5274 true ST4.03ch11: 19464673-19469946 Solanum tuberosum
PGSC0003DMG402028027 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch11: 19464673-19466672 Solanum tuberosum
PGSC0003DMG402028027 5.0kb upstream 5.0kb upstream 8274 true ST4.03ch11: 19466673-19474946 Solanum tuberosum
PGSC0003DMG402028027 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch11: 19469947-19474946 Solanum tuberosum
PGSC0003DMG402028027 5.0kb downstream 5.0kb downstream 8274 true ST4.03ch11: 19461673-19469946 Solanum tuberosum
PGSC0003DMG402028027 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch11: 19461673-19466672 Solanum tuberosum
PGSC0003DMG402028027 10.0kb upstream 10.0kb upstream 13274 true ST4.03ch11: 19466673-19479946 Solanum tuberosum
PGSC0003DMG402028027 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch11: 19469947-19479946 Solanum tuberosum
PGSC0003DMG402028027 10.0kb downstream 10.0kb downstream 13274 true ST4.03ch11: 19456673-19469946 Solanum tuberosum
PGSC0003DMG402028027 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch11: 19456673-19466672 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467078 5263 Asterids View MSA
123743559 5271 Pentapetalae View MSA
122786857 5272 Eudicot View MSA
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain