Gene : PGSC0003DMG400028826 S. tuberosum v4.03
Defline:  (1 of 11) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  549
Name:  ? PGSC0003DMG400028826 Secondary Identifier:  ? PAC:37448608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400028826 0.5kb upstream 0.5kb upstream 7321 true ST4.03ch12: 5941545-5948865 Solanum tuberosum
PGSC0003DMG400028826 0.5kb upstream 0.5kb upstream 500 false ST4.03ch12: 5948366-5948865 Solanum tuberosum
PGSC0003DMG400028826 0.5kb downstream 0.5kb downstream 7321 true ST4.03ch12: 5941045-5948365 Solanum tuberosum
PGSC0003DMG400028826 0.5kb downstream 0.5kb downstream 500 false ST4.03ch12: 5941045-5941544 Solanum tuberosum
PGSC0003DMG400028826 1.0kb upstream 1.0kb upstream 7821 true ST4.03ch12: 5941545-5949365 Solanum tuberosum
PGSC0003DMG400028826 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch12: 5948366-5949365 Solanum tuberosum
PGSC0003DMG400028826 1.0kb downstream 1.0kb downstream 7821 true ST4.03ch12: 5940545-5948365 Solanum tuberosum
PGSC0003DMG400028826 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch12: 5940545-5941544 Solanum tuberosum
PGSC0003DMG400028826 2.0kb upstream 2.0kb upstream 8821 true ST4.03ch12: 5941545-5950365 Solanum tuberosum
PGSC0003DMG400028826 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch12: 5948366-5950365 Solanum tuberosum
PGSC0003DMG400028826 2.0kb downstream 2.0kb downstream 8821 true ST4.03ch12: 5939545-5948365 Solanum tuberosum
PGSC0003DMG400028826 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch12: 5939545-5941544 Solanum tuberosum
PGSC0003DMG400028826 5.0kb upstream 5.0kb upstream 11821 true ST4.03ch12: 5941545-5953365 Solanum tuberosum
PGSC0003DMG400028826 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch12: 5948366-5953365 Solanum tuberosum
PGSC0003DMG400028826 5.0kb downstream 5.0kb downstream 11821 true ST4.03ch12: 5936545-5948365 Solanum tuberosum
PGSC0003DMG400028826 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch12: 5936545-5941544 Solanum tuberosum
PGSC0003DMG400028826 10.0kb upstream 10.0kb upstream 16821 true ST4.03ch12: 5941545-5958365 Solanum tuberosum
PGSC0003DMG400028826 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch12: 5948366-5958365 Solanum tuberosum
PGSC0003DMG400028826 10.0kb downstream 10.0kb downstream 16821 true ST4.03ch12: 5931545-5948365 Solanum tuberosum
PGSC0003DMG400028826 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch12: 5931545-5941544 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481245 5263 Asterids View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain