Gene : PGSC0003DMG400030612 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  2487
Name:  ? PGSC0003DMG400030612 Secondary Identifier:  ? PAC:37427704
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum GLYSYN-PWY Solanum tuberosum pathologic  
Stuberosum PWY-2161 Solanum tuberosum pathologic  
Stuberosum PWY-3841 Solanum tuberosum pathologic  
Stuberosum SER-GLYSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400030612 0.5kb upstream 0.5kb upstream 6172 true ST4.03ch02: 41964954-41971125 Solanum tuberosum
PGSC0003DMG400030612 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 41964954-41965453 Solanum tuberosum
PGSC0003DMG400030612 0.5kb downstream 0.5kb downstream 6172 true ST4.03ch02: 41965454-41971625 Solanum tuberosum
PGSC0003DMG400030612 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 41971126-41971625 Solanum tuberosum
PGSC0003DMG400030612 1.0kb upstream 1.0kb upstream 6672 true ST4.03ch02: 41964454-41971125 Solanum tuberosum
PGSC0003DMG400030612 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 41964454-41965453 Solanum tuberosum
PGSC0003DMG400030612 1.0kb downstream 1.0kb downstream 6672 true ST4.03ch02: 41965454-41972125 Solanum tuberosum
PGSC0003DMG400030612 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 41971126-41972125 Solanum tuberosum
PGSC0003DMG400030612 2.0kb upstream 2.0kb upstream 7672 true ST4.03ch02: 41963454-41971125 Solanum tuberosum
PGSC0003DMG400030612 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 41963454-41965453 Solanum tuberosum
PGSC0003DMG400030612 2.0kb downstream 2.0kb downstream 7672 true ST4.03ch02: 41965454-41973125 Solanum tuberosum
PGSC0003DMG400030612 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 41971126-41973125 Solanum tuberosum
PGSC0003DMG400030612 5.0kb upstream 5.0kb upstream 10672 true ST4.03ch02: 41960454-41971125 Solanum tuberosum
PGSC0003DMG400030612 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 41960454-41965453 Solanum tuberosum
PGSC0003DMG400030612 5.0kb downstream 5.0kb downstream 10672 true ST4.03ch02: 41965454-41976125 Solanum tuberosum
PGSC0003DMG400030612 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 41971126-41976125 Solanum tuberosum
PGSC0003DMG400030612 10.0kb upstream 10.0kb upstream 15672 true ST4.03ch02: 41955454-41971125 Solanum tuberosum
PGSC0003DMG400030612 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 41955454-41965453 Solanum tuberosum
PGSC0003DMG400030612 10.0kb downstream 10.0kb downstream 15672 true ST4.03ch02: 41965454-41981125 Solanum tuberosum
PGSC0003DMG400030612 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 41971126-41981125 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467814 5263 Asterids View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain