Gene : PGSC0003DMG400024392 S. tuberosum v4.03
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  1394
Name:  ? PGSC0003DMG400024392 Secondary Identifier:  ? PAC:37471869
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ARO-PWY Solanum tuberosum pathologic  
Stuberosum PWY-6163 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400024392 0.5kb upstream 0.5kb upstream 8828 true ST4.03ch04: 31876652-31885479 Solanum tuberosum
PGSC0003DMG400024392 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 31884980-31885479 Solanum tuberosum
PGSC0003DMG400024392 0.5kb downstream 0.5kb downstream 8828 true ST4.03ch04: 31876152-31884979 Solanum tuberosum
PGSC0003DMG400024392 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 31876152-31876651 Solanum tuberosum
PGSC0003DMG400024392 1.0kb upstream 1.0kb upstream 9328 true ST4.03ch04: 31876652-31885979 Solanum tuberosum
PGSC0003DMG400024392 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 31884980-31885979 Solanum tuberosum
PGSC0003DMG400024392 1.0kb downstream 1.0kb downstream 9328 true ST4.03ch04: 31875652-31884979 Solanum tuberosum
PGSC0003DMG400024392 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 31875652-31876651 Solanum tuberosum
PGSC0003DMG400024392 2.0kb upstream 2.0kb upstream 10328 true ST4.03ch04: 31876652-31886979 Solanum tuberosum
PGSC0003DMG400024392 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 31884980-31886979 Solanum tuberosum
PGSC0003DMG400024392 2.0kb downstream 2.0kb downstream 10328 true ST4.03ch04: 31874652-31884979 Solanum tuberosum
PGSC0003DMG400024392 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 31874652-31876651 Solanum tuberosum
PGSC0003DMG400024392 5.0kb upstream 5.0kb upstream 13328 true ST4.03ch04: 31876652-31889979 Solanum tuberosum
PGSC0003DMG400024392 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 31884980-31889979 Solanum tuberosum
PGSC0003DMG400024392 5.0kb downstream 5.0kb downstream 13328 true ST4.03ch04: 31871652-31884979 Solanum tuberosum
PGSC0003DMG400024392 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 31871652-31876651 Solanum tuberosum
PGSC0003DMG400024392 10.0kb upstream 10.0kb upstream 18328 true ST4.03ch04: 31876652-31894979 Solanum tuberosum
PGSC0003DMG400024392 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 31884980-31894979 Solanum tuberosum
PGSC0003DMG400024392 10.0kb downstream 10.0kb downstream 18328 true ST4.03ch04: 31866652-31884979 Solanum tuberosum
PGSC0003DMG400024392 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 31866652-31876651 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
121475798 5263 Asterids View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain