Gene : PGSC0003DMG400023576 S. tuberosum v4.03
Defline:  (1 of 2) K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Genomic Order:  673
Name:  ? PGSC0003DMG400023576 Secondary Identifier:  ? PAC:37475818
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-5080 Solanum tuberosum pathologic  
Stuberosum PWY-6433 Solanum tuberosum pathologic  
Stuberosum PWY-6598 Solanum tuberosum pathologic  
Stuberosum PWY-7036 Solanum tuberosum pathologic  
Stuberosum PWY-7601 Solanum tuberosum pathologic  
Stuberosum PWY-7606 Solanum tuberosum pathologic  
Stuberosum PWY-7619 Solanum tuberosum pathologic  
Stuberosum PWY-7726 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400023576 0.5kb upstream 0.5kb upstream 7014 true ST4.03ch04: 8252781-8259794 Solanum tuberosum
PGSC0003DMG400023576 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 8259295-8259794 Solanum tuberosum
PGSC0003DMG400023576 0.5kb downstream 0.5kb downstream 7014 true ST4.03ch04: 8252281-8259294 Solanum tuberosum
PGSC0003DMG400023576 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 8252281-8252780 Solanum tuberosum
PGSC0003DMG400023576 1.0kb upstream 1.0kb upstream 7514 true ST4.03ch04: 8252781-8260294 Solanum tuberosum
PGSC0003DMG400023576 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 8259295-8260294 Solanum tuberosum
PGSC0003DMG400023576 1.0kb downstream 1.0kb downstream 7514 true ST4.03ch04: 8251781-8259294 Solanum tuberosum
PGSC0003DMG400023576 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 8251781-8252780 Solanum tuberosum
PGSC0003DMG400023576 2.0kb upstream 2.0kb upstream 8514 true ST4.03ch04: 8252781-8261294 Solanum tuberosum
PGSC0003DMG400023576 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 8259295-8261294 Solanum tuberosum
PGSC0003DMG400023576 2.0kb downstream 2.0kb downstream 8514 true ST4.03ch04: 8250781-8259294 Solanum tuberosum
PGSC0003DMG400023576 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 8250781-8252780 Solanum tuberosum
PGSC0003DMG400023576 5.0kb upstream 5.0kb upstream 11514 true ST4.03ch04: 8252781-8264294 Solanum tuberosum
PGSC0003DMG400023576 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 8259295-8264294 Solanum tuberosum
PGSC0003DMG400023576 5.0kb downstream 5.0kb downstream 11514 true ST4.03ch04: 8247781-8259294 Solanum tuberosum
PGSC0003DMG400023576 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 8247781-8252780 Solanum tuberosum
PGSC0003DMG400023576 10.0kb upstream 10.0kb upstream 16514 true ST4.03ch04: 8252781-8269294 Solanum tuberosum
PGSC0003DMG400023576 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 8259295-8269294 Solanum tuberosum
PGSC0003DMG400023576 10.0kb downstream 10.0kb downstream 16514 true ST4.03ch04: 8242781-8259294 Solanum tuberosum
PGSC0003DMG400023576 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 8242781-8252780 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472057 5263 Asterids View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain