Gene : PGSC0003DMG400025437 S. tuberosum v4.03

Defline:  (1 of 1) K11664 - vacuolar protein sorting-associated protein 72 (VPS72, TCFL1, YL1) Genomic Order:  467
Name:  ? PGSC0003DMG400025437 Secondary Identifier:  ? PAC:37471694

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400025437 0.5kb upstream 0.5kb upstream 7256 true ST4.03ch04: 5435334-5442589 Solanum tuberosum
PGSC0003DMG400025437 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 5435334-5435833 Solanum tuberosum
PGSC0003DMG400025437 0.5kb downstream 0.5kb downstream 7256 true ST4.03ch04: 5435834-5443089 Solanum tuberosum
PGSC0003DMG400025437 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 5442590-5443089 Solanum tuberosum
PGSC0003DMG400025437 1.0kb upstream 1.0kb upstream 7756 true ST4.03ch04: 5434834-5442589 Solanum tuberosum
PGSC0003DMG400025437 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 5434834-5435833 Solanum tuberosum
PGSC0003DMG400025437 1.0kb downstream 1.0kb downstream 7756 true ST4.03ch04: 5435834-5443589 Solanum tuberosum
PGSC0003DMG400025437 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 5442590-5443589 Solanum tuberosum
PGSC0003DMG400025437 2.0kb upstream 2.0kb upstream 8756 true ST4.03ch04: 5433834-5442589 Solanum tuberosum
PGSC0003DMG400025437 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 5433834-5435833 Solanum tuberosum
PGSC0003DMG400025437 2.0kb downstream 2.0kb downstream 8756 true ST4.03ch04: 5435834-5444589 Solanum tuberosum
PGSC0003DMG400025437 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 5442590-5444589 Solanum tuberosum
PGSC0003DMG400025437 5.0kb upstream 5.0kb upstream 11756 true ST4.03ch04: 5430834-5442589 Solanum tuberosum
PGSC0003DMG400025437 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 5430834-5435833 Solanum tuberosum
PGSC0003DMG400025437 5.0kb downstream 5.0kb downstream 11756 true ST4.03ch04: 5435834-5447589 Solanum tuberosum
PGSC0003DMG400025437 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 5442590-5447589 Solanum tuberosum
PGSC0003DMG400025437 10.0kb upstream 10.0kb upstream 16756 true ST4.03ch04: 5425834-5442589 Solanum tuberosum
PGSC0003DMG400025437 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 5425834-5435833 Solanum tuberosum
PGSC0003DMG400025437 10.0kb downstream 10.0kb downstream 16756 true ST4.03ch04: 5435834-5452589 Solanum tuberosum
PGSC0003DMG400025437 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 5442590-5452589 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467037 5263 Asterids View MSA
123736798 5271 Pentapetalae View MSA
122788024 5272 Eudicot View MSA
122046393 5273 Angiosperm View MSA
121347831 5274 Embryophyte View MSA
123424205 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain