Gene : PGSC0003DMG400027563 S. tuberosum v4.03

Defline:  (1 of 1) PTHR21297//PTHR21297:SF1 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASE II PROTEIN Genomic Order:  2550
Name:  ? PGSC0003DMG400027563 Secondary Identifier:  ? PAC:37473550

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400027563 0.5kb upstream 0.5kb upstream 7482 true ST4.03ch04: 62097767-62105248 Solanum tuberosum
PGSC0003DMG400027563 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 62097767-62098266 Solanum tuberosum
PGSC0003DMG400027563 0.5kb downstream 0.5kb downstream 7482 true ST4.03ch04: 62098267-62105748 Solanum tuberosum
PGSC0003DMG400027563 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 62105249-62105748 Solanum tuberosum
PGSC0003DMG400027563 1.0kb upstream 1.0kb upstream 7982 true ST4.03ch04: 62097267-62105248 Solanum tuberosum
PGSC0003DMG400027563 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 62097267-62098266 Solanum tuberosum
PGSC0003DMG400027563 1.0kb downstream 1.0kb downstream 7982 true ST4.03ch04: 62098267-62106248 Solanum tuberosum
PGSC0003DMG400027563 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 62105249-62106248 Solanum tuberosum
PGSC0003DMG400027563 2.0kb upstream 2.0kb upstream 8982 true ST4.03ch04: 62096267-62105248 Solanum tuberosum
PGSC0003DMG400027563 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 62096267-62098266 Solanum tuberosum
PGSC0003DMG400027563 2.0kb downstream 2.0kb downstream 8982 true ST4.03ch04: 62098267-62107248 Solanum tuberosum
PGSC0003DMG400027563 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 62105249-62107248 Solanum tuberosum
PGSC0003DMG400027563 5.0kb upstream 5.0kb upstream 11982 true ST4.03ch04: 62093267-62105248 Solanum tuberosum
PGSC0003DMG400027563 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 62093267-62098266 Solanum tuberosum
PGSC0003DMG400027563 5.0kb downstream 5.0kb downstream 11982 true ST4.03ch04: 62098267-62110248 Solanum tuberosum
PGSC0003DMG400027563 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 62105249-62110248 Solanum tuberosum
PGSC0003DMG400027563 10.0kb upstream 10.0kb upstream 16982 true ST4.03ch04: 62088267-62105248 Solanum tuberosum
PGSC0003DMG400027563 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 62088267-62098266 Solanum tuberosum
PGSC0003DMG400027563 10.0kb downstream 10.0kb downstream 16982 true ST4.03ch04: 62098267-62115248 Solanum tuberosum
PGSC0003DMG400027563 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 62105249-62115248 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041351 5273 Angiosperm View MSA
121473263 5263 Asterids View MSA
123739960 5271 Pentapetalae View MSA
122791365 5272 Eudicot View MSA
121346749 5274 Embryophyte View MSA
123424526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain