Gene : PGSC0003DMG400027239 S. tuberosum v4.03
Defline:  (1 of 2) PTHR31375//PTHR31375:SF3 - FAMILY NOT NAMED // POLYGALACTURONASE ADPG1-RELATED Genomic Order:  793
Name:  ? PGSC0003DMG400027239 Secondary Identifier:  ? PAC:37474673
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-1081 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400027239 0.5kb upstream 0.5kb upstream 10172 true ST4.03ch04: 9846010-9856181 Solanum tuberosum
PGSC0003DMG400027239 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 9846010-9846509 Solanum tuberosum
PGSC0003DMG400027239 0.5kb downstream 0.5kb downstream 10172 true ST4.03ch04: 9846510-9856681 Solanum tuberosum
PGSC0003DMG400027239 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 9856182-9856681 Solanum tuberosum
PGSC0003DMG400027239 1.0kb upstream 1.0kb upstream 10672 true ST4.03ch04: 9845510-9856181 Solanum tuberosum
PGSC0003DMG400027239 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 9845510-9846509 Solanum tuberosum
PGSC0003DMG400027239 1.0kb downstream 1.0kb downstream 10672 true ST4.03ch04: 9846510-9857181 Solanum tuberosum
PGSC0003DMG400027239 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 9856182-9857181 Solanum tuberosum
PGSC0003DMG400027239 2.0kb upstream 2.0kb upstream 11672 true ST4.03ch04: 9844510-9856181 Solanum tuberosum
PGSC0003DMG400027239 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 9844510-9846509 Solanum tuberosum
PGSC0003DMG400027239 2.0kb downstream 2.0kb downstream 11672 true ST4.03ch04: 9846510-9858181 Solanum tuberosum
PGSC0003DMG400027239 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 9856182-9858181 Solanum tuberosum
PGSC0003DMG400027239 5.0kb upstream 5.0kb upstream 14672 true ST4.03ch04: 9841510-9856181 Solanum tuberosum
PGSC0003DMG400027239 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 9841510-9846509 Solanum tuberosum
PGSC0003DMG400027239 5.0kb downstream 5.0kb downstream 14672 true ST4.03ch04: 9846510-9861181 Solanum tuberosum
PGSC0003DMG400027239 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 9856182-9861181 Solanum tuberosum
PGSC0003DMG400027239 10.0kb upstream 10.0kb upstream 19672 true ST4.03ch04: 9836510-9856181 Solanum tuberosum
PGSC0003DMG400027239 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 9836510-9846509 Solanum tuberosum
PGSC0003DMG400027239 10.0kb downstream 10.0kb downstream 19672 true ST4.03ch04: 9846510-9866181 Solanum tuberosum
PGSC0003DMG400027239 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 9856182-9866181 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477959 5263 Asterids View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain