Gene : PGSC0003DMG400031370 S. tuberosum v4.03
Defline:  (1 of 2) PTHR11624:SF76 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATED Genomic Order:  309
Name:  ? PGSC0003DMG400031370 Secondary Identifier:  ? PAC:37474289
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-5173 Solanum tuberosum pathologic  
Stuberosum PWY-5464 Solanum tuberosum pathologic  
Stuberosum PYRUVDEHYD-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400031370 0.5kb upstream 0.5kb upstream 4939 true ST4.03ch04: 3590952-3595890 Solanum tuberosum
PGSC0003DMG400031370 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 3590952-3591451 Solanum tuberosum
PGSC0003DMG400031370 0.5kb downstream 0.5kb downstream 4939 true ST4.03ch04: 3591452-3596390 Solanum tuberosum
PGSC0003DMG400031370 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 3595891-3596390 Solanum tuberosum
PGSC0003DMG400031370 1.0kb upstream 1.0kb upstream 5439 true ST4.03ch04: 3590452-3595890 Solanum tuberosum
PGSC0003DMG400031370 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 3590452-3591451 Solanum tuberosum
PGSC0003DMG400031370 1.0kb downstream 1.0kb downstream 5439 true ST4.03ch04: 3591452-3596890 Solanum tuberosum
PGSC0003DMG400031370 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 3595891-3596890 Solanum tuberosum
PGSC0003DMG400031370 2.0kb upstream 2.0kb upstream 6439 true ST4.03ch04: 3589452-3595890 Solanum tuberosum
PGSC0003DMG400031370 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 3589452-3591451 Solanum tuberosum
PGSC0003DMG400031370 2.0kb downstream 2.0kb downstream 6439 true ST4.03ch04: 3591452-3597890 Solanum tuberosum
PGSC0003DMG400031370 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 3595891-3597890 Solanum tuberosum
PGSC0003DMG400031370 5.0kb upstream 5.0kb upstream 9439 true ST4.03ch04: 3586452-3595890 Solanum tuberosum
PGSC0003DMG400031370 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 3586452-3591451 Solanum tuberosum
PGSC0003DMG400031370 5.0kb downstream 5.0kb downstream 9439 true ST4.03ch04: 3591452-3600890 Solanum tuberosum
PGSC0003DMG400031370 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 3595891-3600890 Solanum tuberosum
PGSC0003DMG400031370 10.0kb upstream 10.0kb upstream 14439 true ST4.03ch04: 3581452-3595890 Solanum tuberosum
PGSC0003DMG400031370 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 3581452-3591451 Solanum tuberosum
PGSC0003DMG400031370 10.0kb downstream 10.0kb downstream 14439 true ST4.03ch04: 3591452-3605890 Solanum tuberosum
PGSC0003DMG400031370 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 3595891-3605890 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475801 5263 Asterids View MSA
123741192 5271 Pentapetalae View MSA
122797029 5272 Eudicot View MSA
122045305 5273 Angiosperm View MSA
121346397 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain