Gene : PGSC0003DMG400002832 S. tuberosum v4.03
Defline:  (1 of 6) PTHR22763//PTHR22763:SF78 - RING ZINC FINGER PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE RHA2A Genomic Order:  50
Name:  ? PGSC0003DMG400002832 Secondary Identifier:  ? PAC:37474791
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-7511 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400002832 0.5kb upstream 0.5kb upstream 995 true ST4.03ch04: 371042-372036 Solanum tuberosum
PGSC0003DMG400002832 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 371042-371541 Solanum tuberosum
PGSC0003DMG400002832 0.5kb downstream 0.5kb downstream 995 true ST4.03ch04: 371542-372536 Solanum tuberosum
PGSC0003DMG400002832 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 372037-372536 Solanum tuberosum
PGSC0003DMG400002832 1.0kb upstream 1.0kb upstream 1495 true ST4.03ch04: 370542-372036 Solanum tuberosum
PGSC0003DMG400002832 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 370542-371541 Solanum tuberosum
PGSC0003DMG400002832 1.0kb downstream 1.0kb downstream 1495 true ST4.03ch04: 371542-373036 Solanum tuberosum
PGSC0003DMG400002832 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 372037-373036 Solanum tuberosum
PGSC0003DMG400002832 2.0kb upstream 2.0kb upstream 2495 true ST4.03ch04: 369542-372036 Solanum tuberosum
PGSC0003DMG400002832 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 369542-371541 Solanum tuberosum
PGSC0003DMG400002832 2.0kb downstream 2.0kb downstream 2495 true ST4.03ch04: 371542-374036 Solanum tuberosum
PGSC0003DMG400002832 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 372037-374036 Solanum tuberosum
PGSC0003DMG400002832 5.0kb upstream 5.0kb upstream 5495 true ST4.03ch04: 366542-372036 Solanum tuberosum
PGSC0003DMG400002832 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 366542-371541 Solanum tuberosum
PGSC0003DMG400002832 5.0kb downstream 5.0kb downstream 5495 true ST4.03ch04: 371542-377036 Solanum tuberosum
PGSC0003DMG400002832 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 372037-377036 Solanum tuberosum
PGSC0003DMG400002832 10.0kb upstream 10.0kb upstream 10495 true ST4.03ch04: 361542-372036 Solanum tuberosum
PGSC0003DMG400002832 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 361542-371541 Solanum tuberosum
PGSC0003DMG400002832 10.0kb downstream 10.0kb downstream 10495 true ST4.03ch04: 371542-382036 Solanum tuberosum
PGSC0003DMG400002832 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 372037-382036 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121390017 5263 Asterids View MSA
123753333 5271 Pentapetalae View MSA
122775058 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain