Gene : PGSC0003DMG400006008 S. tuberosum v4.03
Defline:  (1 of 3) PTHR11088//PTHR11088:SF27 - TRNA DELTA 2 -ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED // ADENYLATE ISOPENTENYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  130
Name:  ? PGSC0003DMG400006008 Secondary Identifier:  ? PAC:37472533
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-2681 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400006008 0.5kb upstream 0.5kb upstream 1337 true ST4.03ch04: 1541042-1542378 Solanum tuberosum
PGSC0003DMG400006008 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 1541042-1541541 Solanum tuberosum
PGSC0003DMG400006008 0.5kb downstream 0.5kb downstream 1337 true ST4.03ch04: 1541542-1542878 Solanum tuberosum
PGSC0003DMG400006008 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 1542379-1542878 Solanum tuberosum
PGSC0003DMG400006008 1.0kb upstream 1.0kb upstream 1837 true ST4.03ch04: 1540542-1542378 Solanum tuberosum
PGSC0003DMG400006008 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 1540542-1541541 Solanum tuberosum
PGSC0003DMG400006008 1.0kb downstream 1.0kb downstream 1837 true ST4.03ch04: 1541542-1543378 Solanum tuberosum
PGSC0003DMG400006008 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 1542379-1543378 Solanum tuberosum
PGSC0003DMG400006008 2.0kb upstream 2.0kb upstream 2837 true ST4.03ch04: 1539542-1542378 Solanum tuberosum
PGSC0003DMG400006008 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 1539542-1541541 Solanum tuberosum
PGSC0003DMG400006008 2.0kb downstream 2.0kb downstream 2837 true ST4.03ch04: 1541542-1544378 Solanum tuberosum
PGSC0003DMG400006008 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 1542379-1544378 Solanum tuberosum
PGSC0003DMG400006008 5.0kb upstream 5.0kb upstream 5837 true ST4.03ch04: 1536542-1542378 Solanum tuberosum
PGSC0003DMG400006008 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 1536542-1541541 Solanum tuberosum
PGSC0003DMG400006008 5.0kb downstream 5.0kb downstream 5837 true ST4.03ch04: 1541542-1547378 Solanum tuberosum
PGSC0003DMG400006008 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 1542379-1547378 Solanum tuberosum
PGSC0003DMG400006008 10.0kb upstream 10.0kb upstream 10837 true ST4.03ch04: 1531542-1542378 Solanum tuberosum
PGSC0003DMG400006008 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 1531542-1541541 Solanum tuberosum
PGSC0003DMG400006008 10.0kb downstream 10.0kb downstream 10837 true ST4.03ch04: 1541542-1552378 Solanum tuberosum
PGSC0003DMG400006008 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 1542379-1552378 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470077 5263 Asterids View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain