Gene : PGSC0003DMG400008701 S. tuberosum v4.03

Defline:  (1 of 2) K14765 - U3 small nucleolar ribonucleoprotein protein LCP5 (NGDN, LCP5) Genomic Order:  2026
Name:  ? PGSC0003DMG400008701 Secondary Identifier:  ? PAC:37472627

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400008701 0.5kb upstream 0.5kb upstream 4065 true ST4.03ch04: 52558643-52562707 Solanum tuberosum
PGSC0003DMG400008701 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 52562208-52562707 Solanum tuberosum
PGSC0003DMG400008701 0.5kb downstream 0.5kb downstream 4065 true ST4.03ch04: 52558143-52562207 Solanum tuberosum
PGSC0003DMG400008701 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 52558143-52558642 Solanum tuberosum
PGSC0003DMG400008701 1.0kb upstream 1.0kb upstream 4565 true ST4.03ch04: 52558643-52563207 Solanum tuberosum
PGSC0003DMG400008701 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 52562208-52563207 Solanum tuberosum
PGSC0003DMG400008701 1.0kb downstream 1.0kb downstream 4565 true ST4.03ch04: 52557643-52562207 Solanum tuberosum
PGSC0003DMG400008701 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 52557643-52558642 Solanum tuberosum
PGSC0003DMG400008701 2.0kb upstream 2.0kb upstream 5565 true ST4.03ch04: 52558643-52564207 Solanum tuberosum
PGSC0003DMG400008701 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 52562208-52564207 Solanum tuberosum
PGSC0003DMG400008701 2.0kb downstream 2.0kb downstream 5565 true ST4.03ch04: 52556643-52562207 Solanum tuberosum
PGSC0003DMG400008701 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 52556643-52558642 Solanum tuberosum
PGSC0003DMG400008701 5.0kb upstream 5.0kb upstream 8565 true ST4.03ch04: 52558643-52567207 Solanum tuberosum
PGSC0003DMG400008701 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 52562208-52567207 Solanum tuberosum
PGSC0003DMG400008701 5.0kb downstream 5.0kb downstream 8565 true ST4.03ch04: 52553643-52562207 Solanum tuberosum
PGSC0003DMG400008701 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 52553643-52558642 Solanum tuberosum
PGSC0003DMG400008701 10.0kb upstream 10.0kb upstream 13565 true ST4.03ch04: 52558643-52572207 Solanum tuberosum
PGSC0003DMG400008701 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 52562208-52572207 Solanum tuberosum
PGSC0003DMG400008701 10.0kb downstream 10.0kb downstream 13565 true ST4.03ch04: 52548643-52562207 Solanum tuberosum
PGSC0003DMG400008701 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 52548643-52558642 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473654 5263 Asterids View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain