Gene : PGSC0003DMG400010637 S. tuberosum v4.03
Defline:  (1 of 2) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Genomic Order:  920
Name:  ? PGSC0003DMG400010637 Secondary Identifier:  ? PAC:37475964
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum CAROTENOID-PWY Solanum tuberosum pathologic  
Stuberosum PWY-5943 Solanum tuberosum pathologic  
Stuberosum PWY-5947 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400010637 0.5kb upstream 0.5kb upstream 2003 true ST4.03ch04: 12331394-12333396 Solanum tuberosum
PGSC0003DMG400010637 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 12331394-12331893 Solanum tuberosum
PGSC0003DMG400010637 0.5kb downstream 0.5kb downstream 2003 true ST4.03ch04: 12331894-12333896 Solanum tuberosum
PGSC0003DMG400010637 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 12333397-12333896 Solanum tuberosum
PGSC0003DMG400010637 1.0kb upstream 1.0kb upstream 2503 true ST4.03ch04: 12330894-12333396 Solanum tuberosum
PGSC0003DMG400010637 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 12330894-12331893 Solanum tuberosum
PGSC0003DMG400010637 1.0kb downstream 1.0kb downstream 2503 true ST4.03ch04: 12331894-12334396 Solanum tuberosum
PGSC0003DMG400010637 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 12333397-12334396 Solanum tuberosum
PGSC0003DMG400010637 2.0kb upstream 2.0kb upstream 3503 true ST4.03ch04: 12329894-12333396 Solanum tuberosum
PGSC0003DMG400010637 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 12329894-12331893 Solanum tuberosum
PGSC0003DMG400010637 2.0kb downstream 2.0kb downstream 3503 true ST4.03ch04: 12331894-12335396 Solanum tuberosum
PGSC0003DMG400010637 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 12333397-12335396 Solanum tuberosum
PGSC0003DMG400010637 5.0kb upstream 5.0kb upstream 6503 true ST4.03ch04: 12326894-12333396 Solanum tuberosum
PGSC0003DMG400010637 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 12326894-12331893 Solanum tuberosum
PGSC0003DMG400010637 5.0kb downstream 5.0kb downstream 6503 true ST4.03ch04: 12331894-12338396 Solanum tuberosum
PGSC0003DMG400010637 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 12333397-12338396 Solanum tuberosum
PGSC0003DMG400010637 10.0kb upstream 10.0kb upstream 11503 true ST4.03ch04: 12321894-12333396 Solanum tuberosum
PGSC0003DMG400010637 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 12321894-12331893 Solanum tuberosum
PGSC0003DMG400010637 10.0kb downstream 10.0kb downstream 11503 true ST4.03ch04: 12331894-12343396 Solanum tuberosum
PGSC0003DMG400010637 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 12333397-12343396 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471743 5263 Asterids View MSA
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain