Gene : PGSC0003DMG400016589 S. tuberosum v4.03
Defline:  (1 of 1) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Genomic Order:  2092
Name:  ? PGSC0003DMG400016589 Secondary Identifier:  ? PAC:37475335
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-6724 Solanum tuberosum pathologic  
Stuberosum PWY-7238 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400016589 0.5kb upstream 0.5kb upstream 6687 true ST4.03ch04: 53993570-54000256 Solanum tuberosum
PGSC0003DMG400016589 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 53993570-53994069 Solanum tuberosum
PGSC0003DMG400016589 0.5kb downstream 0.5kb downstream 6687 true ST4.03ch04: 53994070-54000756 Solanum tuberosum
PGSC0003DMG400016589 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 54000257-54000756 Solanum tuberosum
PGSC0003DMG400016589 1.0kb upstream 1.0kb upstream 7187 true ST4.03ch04: 53993070-54000256 Solanum tuberosum
PGSC0003DMG400016589 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 53993070-53994069 Solanum tuberosum
PGSC0003DMG400016589 1.0kb downstream 1.0kb downstream 7187 true ST4.03ch04: 53994070-54001256 Solanum tuberosum
PGSC0003DMG400016589 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 54000257-54001256 Solanum tuberosum
PGSC0003DMG400016589 2.0kb upstream 2.0kb upstream 8187 true ST4.03ch04: 53992070-54000256 Solanum tuberosum
PGSC0003DMG400016589 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 53992070-53994069 Solanum tuberosum
PGSC0003DMG400016589 2.0kb downstream 2.0kb downstream 8187 true ST4.03ch04: 53994070-54002256 Solanum tuberosum
PGSC0003DMG400016589 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 54000257-54002256 Solanum tuberosum
PGSC0003DMG400016589 5.0kb upstream 5.0kb upstream 11187 true ST4.03ch04: 53989070-54000256 Solanum tuberosum
PGSC0003DMG400016589 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 53989070-53994069 Solanum tuberosum
PGSC0003DMG400016589 5.0kb downstream 5.0kb downstream 11187 true ST4.03ch04: 53994070-54005256 Solanum tuberosum
PGSC0003DMG400016589 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 54000257-54005256 Solanum tuberosum
PGSC0003DMG400016589 10.0kb upstream 10.0kb upstream 16187 true ST4.03ch04: 53984070-54000256 Solanum tuberosum
PGSC0003DMG400016589 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 53984070-53994069 Solanum tuberosum
PGSC0003DMG400016589 10.0kb downstream 10.0kb downstream 16187 true ST4.03ch04: 53994070-54010256 Solanum tuberosum
PGSC0003DMG400016589 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 54000257-54010256 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474461 5263 Asterids View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain