Gene : PGSC0003DMG405012723 S. tuberosum v4.03
Defline:  (1 of 48) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  882
Name:  ? PGSC0003DMG405012723 Secondary Identifier:  ? PAC:37473510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG405012723 0.5kb upstream 0.5kb upstream 2801 true ST4.03ch04: 11215060-11217860 Solanum tuberosum
PGSC0003DMG405012723 0.5kb upstream 0.5kb upstream 500 false ST4.03ch04: 11217361-11217860 Solanum tuberosum
PGSC0003DMG405012723 0.5kb downstream 0.5kb downstream 2801 true ST4.03ch04: 11214560-11217360 Solanum tuberosum
PGSC0003DMG405012723 0.5kb downstream 0.5kb downstream 500 false ST4.03ch04: 11214560-11215059 Solanum tuberosum
PGSC0003DMG405012723 1.0kb upstream 1.0kb upstream 3301 true ST4.03ch04: 11215060-11218360 Solanum tuberosum
PGSC0003DMG405012723 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch04: 11217361-11218360 Solanum tuberosum
PGSC0003DMG405012723 1.0kb downstream 1.0kb downstream 3301 true ST4.03ch04: 11214060-11217360 Solanum tuberosum
PGSC0003DMG405012723 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch04: 11214060-11215059 Solanum tuberosum
PGSC0003DMG405012723 2.0kb upstream 2.0kb upstream 4301 true ST4.03ch04: 11215060-11219360 Solanum tuberosum
PGSC0003DMG405012723 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch04: 11217361-11219360 Solanum tuberosum
PGSC0003DMG405012723 2.0kb downstream 2.0kb downstream 4301 true ST4.03ch04: 11213060-11217360 Solanum tuberosum
PGSC0003DMG405012723 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch04: 11213060-11215059 Solanum tuberosum
PGSC0003DMG405012723 5.0kb upstream 5.0kb upstream 7301 true ST4.03ch04: 11215060-11222360 Solanum tuberosum
PGSC0003DMG405012723 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch04: 11217361-11222360 Solanum tuberosum
PGSC0003DMG405012723 5.0kb downstream 5.0kb downstream 7301 true ST4.03ch04: 11210060-11217360 Solanum tuberosum
PGSC0003DMG405012723 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch04: 11210060-11215059 Solanum tuberosum
PGSC0003DMG405012723 10.0kb upstream 10.0kb upstream 12301 true ST4.03ch04: 11215060-11227360 Solanum tuberosum
PGSC0003DMG405012723 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch04: 11217361-11227360 Solanum tuberosum
PGSC0003DMG405012723 10.0kb downstream 10.0kb downstream 12301 true ST4.03ch04: 11205060-11217360 Solanum tuberosum
PGSC0003DMG405012723 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch04: 11205060-11215059 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477812 5263 Asterids View MSA
123741335 5271 Pentapetalae View MSA
122792200 5272 Eudicot View MSA
122050004 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain