Gene : PGSC0003DMG400010901 S. tuberosum v4.03
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1691
Name:  ? PGSC0003DMG400010901 Secondary Identifier:  ? PAC:37444872
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400010901 0.5kb upstream 0.5kb upstream 7784 true ST4.03ch05: 35205714-35213497 Solanum tuberosum
PGSC0003DMG400010901 0.5kb upstream 0.5kb upstream 500 false ST4.03ch05: 35205714-35206213 Solanum tuberosum
PGSC0003DMG400010901 0.5kb downstream 0.5kb downstream 7784 true ST4.03ch05: 35206214-35213997 Solanum tuberosum
PGSC0003DMG400010901 0.5kb downstream 0.5kb downstream 500 false ST4.03ch05: 35213498-35213997 Solanum tuberosum
PGSC0003DMG400010901 1.0kb upstream 1.0kb upstream 8284 true ST4.03ch05: 35205214-35213497 Solanum tuberosum
PGSC0003DMG400010901 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch05: 35205214-35206213 Solanum tuberosum
PGSC0003DMG400010901 1.0kb downstream 1.0kb downstream 8284 true ST4.03ch05: 35206214-35214497 Solanum tuberosum
PGSC0003DMG400010901 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch05: 35213498-35214497 Solanum tuberosum
PGSC0003DMG400010901 2.0kb upstream 2.0kb upstream 9284 true ST4.03ch05: 35204214-35213497 Solanum tuberosum
PGSC0003DMG400010901 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch05: 35204214-35206213 Solanum tuberosum
PGSC0003DMG400010901 2.0kb downstream 2.0kb downstream 9284 true ST4.03ch05: 35206214-35215497 Solanum tuberosum
PGSC0003DMG400010901 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch05: 35213498-35215497 Solanum tuberosum
PGSC0003DMG400010901 5.0kb upstream 5.0kb upstream 12284 true ST4.03ch05: 35201214-35213497 Solanum tuberosum
PGSC0003DMG400010901 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch05: 35201214-35206213 Solanum tuberosum
PGSC0003DMG400010901 5.0kb downstream 5.0kb downstream 12284 true ST4.03ch05: 35206214-35218497 Solanum tuberosum
PGSC0003DMG400010901 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch05: 35213498-35218497 Solanum tuberosum
PGSC0003DMG400010901 10.0kb upstream 10.0kb upstream 17284 true ST4.03ch05: 35196214-35213497 Solanum tuberosum
PGSC0003DMG400010901 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch05: 35196214-35206213 Solanum tuberosum
PGSC0003DMG400010901 10.0kb downstream 10.0kb downstream 17284 true ST4.03ch05: 35206214-35223497 Solanum tuberosum
PGSC0003DMG400010901 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch05: 35213498-35223497 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479350 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain