Gene : PGSC0003DMG400004312 S. tuberosum v4.03
Defline:  (1 of 2) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  1439
Name:  ? PGSC0003DMG400004312 Secondary Identifier:  ? PAC:37469672
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-695 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400004312 0.5kb upstream 0.5kb upstream 4907 true ST4.03ch08: 39212904-39217810 Solanum tuberosum
PGSC0003DMG400004312 0.5kb upstream 0.5kb upstream 500 false ST4.03ch08: 39212904-39213403 Solanum tuberosum
PGSC0003DMG400004312 0.5kb downstream 0.5kb downstream 4907 true ST4.03ch08: 39213404-39218310 Solanum tuberosum
PGSC0003DMG400004312 0.5kb downstream 0.5kb downstream 500 false ST4.03ch08: 39217811-39218310 Solanum tuberosum
PGSC0003DMG400004312 1.0kb upstream 1.0kb upstream 5407 true ST4.03ch08: 39212404-39217810 Solanum tuberosum
PGSC0003DMG400004312 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch08: 39212404-39213403 Solanum tuberosum
PGSC0003DMG400004312 1.0kb downstream 1.0kb downstream 5407 true ST4.03ch08: 39213404-39218810 Solanum tuberosum
PGSC0003DMG400004312 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch08: 39217811-39218810 Solanum tuberosum
PGSC0003DMG400004312 2.0kb upstream 2.0kb upstream 6407 true ST4.03ch08: 39211404-39217810 Solanum tuberosum
PGSC0003DMG400004312 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch08: 39211404-39213403 Solanum tuberosum
PGSC0003DMG400004312 2.0kb downstream 2.0kb downstream 6407 true ST4.03ch08: 39213404-39219810 Solanum tuberosum
PGSC0003DMG400004312 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch08: 39217811-39219810 Solanum tuberosum
PGSC0003DMG400004312 5.0kb upstream 5.0kb upstream 9407 true ST4.03ch08: 39208404-39217810 Solanum tuberosum
PGSC0003DMG400004312 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch08: 39208404-39213403 Solanum tuberosum
PGSC0003DMG400004312 5.0kb downstream 5.0kb downstream 9407 true ST4.03ch08: 39213404-39222810 Solanum tuberosum
PGSC0003DMG400004312 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch08: 39217811-39222810 Solanum tuberosum
PGSC0003DMG400004312 10.0kb upstream 10.0kb upstream 14407 true ST4.03ch08: 39203404-39217810 Solanum tuberosum
PGSC0003DMG400004312 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch08: 39203404-39213403 Solanum tuberosum
PGSC0003DMG400004312 10.0kb downstream 10.0kb downstream 14407 true ST4.03ch08: 39213404-39227810 Solanum tuberosum
PGSC0003DMG400004312 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch08: 39217811-39227810 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467874 5263 Asterids View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain