Gene : PGSC0003DMG400004788 S. tuberosum v4.03
Defline:  (1 of 1) PF00805//PF13599 - Pentapeptide repeats (8 copies) (Pentapeptide) // Pentapeptide repeats (9 copies) (Pentapeptide_4) Genomic Order:  2257
Name:  ? PGSC0003DMG400004788 Secondary Identifier:  ? PAC:37468272
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400004788 0.5kb upstream 0.5kb upstream 5338 true ST4.03ch08: 52732351-52737688 Solanum tuberosum
PGSC0003DMG400004788 0.5kb upstream 0.5kb upstream 500 false ST4.03ch08: 52732351-52732850 Solanum tuberosum
PGSC0003DMG400004788 0.5kb downstream 0.5kb downstream 5338 true ST4.03ch08: 52732851-52738188 Solanum tuberosum
PGSC0003DMG400004788 0.5kb downstream 0.5kb downstream 500 false ST4.03ch08: 52737689-52738188 Solanum tuberosum
PGSC0003DMG400004788 1.0kb upstream 1.0kb upstream 5838 true ST4.03ch08: 52731851-52737688 Solanum tuberosum
PGSC0003DMG400004788 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch08: 52731851-52732850 Solanum tuberosum
PGSC0003DMG400004788 1.0kb downstream 1.0kb downstream 5838 true ST4.03ch08: 52732851-52738688 Solanum tuberosum
PGSC0003DMG400004788 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch08: 52737689-52738688 Solanum tuberosum
PGSC0003DMG400004788 2.0kb upstream 2.0kb upstream 6838 true ST4.03ch08: 52730851-52737688 Solanum tuberosum
PGSC0003DMG400004788 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch08: 52730851-52732850 Solanum tuberosum
PGSC0003DMG400004788 2.0kb downstream 2.0kb downstream 6838 true ST4.03ch08: 52732851-52739688 Solanum tuberosum
PGSC0003DMG400004788 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch08: 52737689-52739688 Solanum tuberosum
PGSC0003DMG400004788 5.0kb upstream 5.0kb upstream 9838 true ST4.03ch08: 52727851-52737688 Solanum tuberosum
PGSC0003DMG400004788 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch08: 52727851-52732850 Solanum tuberosum
PGSC0003DMG400004788 5.0kb downstream 5.0kb downstream 9838 true ST4.03ch08: 52732851-52742688 Solanum tuberosum
PGSC0003DMG400004788 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch08: 52737689-52742688 Solanum tuberosum
PGSC0003DMG400004788 10.0kb upstream 10.0kb upstream 14838 true ST4.03ch08: 52722851-52737688 Solanum tuberosum
PGSC0003DMG400004788 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch08: 52722851-52732850 Solanum tuberosum
PGSC0003DMG400004788 10.0kb downstream 10.0kb downstream 14838 true ST4.03ch08: 52732851-52747688 Solanum tuberosum
PGSC0003DMG400004788 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch08: 52737689-52747688 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467911 5263 Asterids View MSA
123751077 5271 Pentapetalae View MSA
122794954 5272 Eudicot View MSA
122044610 5273 Angiosperm View MSA
121348286 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain