Gene : PGSC0003DMG400006289 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11946:SF82 - ISOLEUCINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  2123
Name:  ? PGSC0003DMG400006289 Secondary Identifier:  ? PAC:37441099
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400006289 0.5kb upstream 0.5kb upstream 22562 true ST4.03ch01: 60201320-60223881 Solanum tuberosum
PGSC0003DMG400006289 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 60223382-60223881 Solanum tuberosum
PGSC0003DMG400006289 0.5kb downstream 0.5kb downstream 22562 true ST4.03ch01: 60200820-60223381 Solanum tuberosum
PGSC0003DMG400006289 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 60200820-60201319 Solanum tuberosum
PGSC0003DMG400006289 1.0kb upstream 1.0kb upstream 23062 true ST4.03ch01: 60201320-60224381 Solanum tuberosum
PGSC0003DMG400006289 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 60223382-60224381 Solanum tuberosum
PGSC0003DMG400006289 1.0kb downstream 1.0kb downstream 23062 true ST4.03ch01: 60200320-60223381 Solanum tuberosum
PGSC0003DMG400006289 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 60200320-60201319 Solanum tuberosum
PGSC0003DMG400006289 2.0kb upstream 2.0kb upstream 24062 true ST4.03ch01: 60201320-60225381 Solanum tuberosum
PGSC0003DMG400006289 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 60223382-60225381 Solanum tuberosum
PGSC0003DMG400006289 2.0kb downstream 2.0kb downstream 24062 true ST4.03ch01: 60199320-60223381 Solanum tuberosum
PGSC0003DMG400006289 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 60199320-60201319 Solanum tuberosum
PGSC0003DMG400006289 5.0kb upstream 5.0kb upstream 27062 true ST4.03ch01: 60201320-60228381 Solanum tuberosum
PGSC0003DMG400006289 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 60223382-60228381 Solanum tuberosum
PGSC0003DMG400006289 5.0kb downstream 5.0kb downstream 27062 true ST4.03ch01: 60196320-60223381 Solanum tuberosum
PGSC0003DMG400006289 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 60196320-60201319 Solanum tuberosum
PGSC0003DMG400006289 10.0kb upstream 10.0kb upstream 32062 true ST4.03ch01: 60201320-60233381 Solanum tuberosum
PGSC0003DMG400006289 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 60223382-60233381 Solanum tuberosum
PGSC0003DMG400006289 10.0kb downstream 10.0kb downstream 32062 true ST4.03ch01: 60191320-60223381 Solanum tuberosum
PGSC0003DMG400006289 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 60191320-60201319 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474846 5263 Asterids View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain