Gene : PGSC0003DMG400006291 S. tuberosum v4.03
Defline:  (1 of 3) K02706 - photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  2134
Name:  ? PGSC0003DMG400006291 Secondary Identifier:  ? PAC:37439999
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PHOTOALL-PWY Solanum tuberosum pathologic  
Stuberosum PWY-101 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400006291 0.5kb upstream 0.5kb upstream 863 true ST4.03ch01: 60334192-60335054 Solanum tuberosum
PGSC0003DMG400006291 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 60334555-60335054 Solanum tuberosum
PGSC0003DMG400006291 0.5kb downstream 0.5kb downstream 863 true ST4.03ch01: 60333692-60334554 Solanum tuberosum
PGSC0003DMG400006291 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 60333692-60334191 Solanum tuberosum
PGSC0003DMG400006291 1.0kb upstream 1.0kb upstream 1363 true ST4.03ch01: 60334192-60335554 Solanum tuberosum
PGSC0003DMG400006291 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 60334555-60335554 Solanum tuberosum
PGSC0003DMG400006291 1.0kb downstream 1.0kb downstream 1363 true ST4.03ch01: 60333192-60334554 Solanum tuberosum
PGSC0003DMG400006291 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 60333192-60334191 Solanum tuberosum
PGSC0003DMG400006291 2.0kb upstream 2.0kb upstream 2363 true ST4.03ch01: 60334192-60336554 Solanum tuberosum
PGSC0003DMG400006291 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 60334555-60336554 Solanum tuberosum
PGSC0003DMG400006291 2.0kb downstream 2.0kb downstream 2363 true ST4.03ch01: 60332192-60334554 Solanum tuberosum
PGSC0003DMG400006291 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 60332192-60334191 Solanum tuberosum
PGSC0003DMG400006291 5.0kb upstream 5.0kb upstream 5363 true ST4.03ch01: 60334192-60339554 Solanum tuberosum
PGSC0003DMG400006291 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 60334555-60339554 Solanum tuberosum
PGSC0003DMG400006291 5.0kb downstream 5.0kb downstream 5363 true ST4.03ch01: 60329192-60334554 Solanum tuberosum
PGSC0003DMG400006291 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 60329192-60334191 Solanum tuberosum
PGSC0003DMG400006291 10.0kb upstream 10.0kb upstream 10363 true ST4.03ch01: 60334192-60344554 Solanum tuberosum
PGSC0003DMG400006291 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 60334555-60344554 Solanum tuberosum
PGSC0003DMG400006291 10.0kb downstream 10.0kb downstream 10363 true ST4.03ch01: 60324192-60334554 Solanum tuberosum
PGSC0003DMG400006291 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 60324192-60334191 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481186 5263 Asterids View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain