Gene : PGSC0003DMG400018234 S. tuberosum v4.03
Defline:  (1 of 1) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  3685
Name:  ? PGSC0003DMG400018234 Secondary Identifier:  ? PAC:37437748
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-5188 Solanum tuberosum pathologic  
Stuberosum PWY-5918 Solanum tuberosum pathologic  
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400018234 0.5kb upstream 0.5kb upstream 8829 true ST4.03ch01: 79155168-79163996 Solanum tuberosum
PGSC0003DMG400018234 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 79163497-79163996 Solanum tuberosum
PGSC0003DMG400018234 0.5kb downstream 0.5kb downstream 8829 true ST4.03ch01: 79154668-79163496 Solanum tuberosum
PGSC0003DMG400018234 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 79154668-79155167 Solanum tuberosum
PGSC0003DMG400018234 1.0kb upstream 1.0kb upstream 9329 true ST4.03ch01: 79155168-79164496 Solanum tuberosum
PGSC0003DMG400018234 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 79163497-79164496 Solanum tuberosum
PGSC0003DMG400018234 1.0kb downstream 1.0kb downstream 9329 true ST4.03ch01: 79154168-79163496 Solanum tuberosum
PGSC0003DMG400018234 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 79154168-79155167 Solanum tuberosum
PGSC0003DMG400018234 2.0kb upstream 2.0kb upstream 10329 true ST4.03ch01: 79155168-79165496 Solanum tuberosum
PGSC0003DMG400018234 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 79163497-79165496 Solanum tuberosum
PGSC0003DMG400018234 2.0kb downstream 2.0kb downstream 10329 true ST4.03ch01: 79153168-79163496 Solanum tuberosum
PGSC0003DMG400018234 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 79153168-79155167 Solanum tuberosum
PGSC0003DMG400018234 5.0kb upstream 5.0kb upstream 13329 true ST4.03ch01: 79155168-79168496 Solanum tuberosum
PGSC0003DMG400018234 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 79163497-79168496 Solanum tuberosum
PGSC0003DMG400018234 5.0kb downstream 5.0kb downstream 13329 true ST4.03ch01: 79150168-79163496 Solanum tuberosum
PGSC0003DMG400018234 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 79150168-79155167 Solanum tuberosum
PGSC0003DMG400018234 10.0kb upstream 10.0kb upstream 18329 true ST4.03ch01: 79155168-79173496 Solanum tuberosum
PGSC0003DMG400018234 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 79163497-79173496 Solanum tuberosum
PGSC0003DMG400018234 10.0kb downstream 10.0kb downstream 18329 true ST4.03ch01: 79145168-79163496 Solanum tuberosum
PGSC0003DMG400018234 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 79145168-79155167 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474604 5263 Asterids View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain