Gene : PGSC0003DMG400016412 S. tuberosum v4.03
Defline:  (1 of 1) K01899 - succinyl-CoA synthetase alpha subunit (LSC1) Genomic Order:  268
Name:  ? PGSC0003DMG400016412 Secondary Identifier:  ? PAC:37436748
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-5464 Solanum tuberosum pathologic  
Stuberosum PWY-5690 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400016412 0.5kb upstream 0.5kb upstream 8468 true ST4.03ch01: 3546032-3554499 Solanum tuberosum
PGSC0003DMG400016412 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 3546032-3546531 Solanum tuberosum
PGSC0003DMG400016412 0.5kb downstream 0.5kb downstream 8468 true ST4.03ch01: 3546532-3554999 Solanum tuberosum
PGSC0003DMG400016412 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 3554500-3554999 Solanum tuberosum
PGSC0003DMG400016412 1.0kb upstream 1.0kb upstream 8968 true ST4.03ch01: 3545532-3554499 Solanum tuberosum
PGSC0003DMG400016412 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 3545532-3546531 Solanum tuberosum
PGSC0003DMG400016412 1.0kb downstream 1.0kb downstream 8968 true ST4.03ch01: 3546532-3555499 Solanum tuberosum
PGSC0003DMG400016412 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 3554500-3555499 Solanum tuberosum
PGSC0003DMG400016412 2.0kb upstream 2.0kb upstream 9968 true ST4.03ch01: 3544532-3554499 Solanum tuberosum
PGSC0003DMG400016412 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 3544532-3546531 Solanum tuberosum
PGSC0003DMG400016412 2.0kb downstream 2.0kb downstream 9968 true ST4.03ch01: 3546532-3556499 Solanum tuberosum
PGSC0003DMG400016412 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 3554500-3556499 Solanum tuberosum
PGSC0003DMG400016412 5.0kb upstream 5.0kb upstream 12968 true ST4.03ch01: 3541532-3554499 Solanum tuberosum
PGSC0003DMG400016412 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 3541532-3546531 Solanum tuberosum
PGSC0003DMG400016412 5.0kb downstream 5.0kb downstream 12968 true ST4.03ch01: 3546532-3559499 Solanum tuberosum
PGSC0003DMG400016412 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 3554500-3559499 Solanum tuberosum
PGSC0003DMG400016412 10.0kb upstream 10.0kb upstream 17968 true ST4.03ch01: 3536532-3554499 Solanum tuberosum
PGSC0003DMG400016412 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 3536532-3546531 Solanum tuberosum
PGSC0003DMG400016412 10.0kb downstream 10.0kb downstream 17968 true ST4.03ch01: 3546532-3564499 Solanum tuberosum
PGSC0003DMG400016412 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 3554500-3564499 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469276 5263 Asterids View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain