Gene : PGSC0003DMG400033114 S. tuberosum v4.03
Defline:  (1 of 1) PTHR10277//PTHR10277:SF38 - HOMOCITRATE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2188
Name:  ? PGSC0003DMG400033114 Secondary Identifier:  ? PAC:37441115
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum LEU-DEG2-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400033114 0.5kb upstream 0.5kb upstream 9816 true ST4.03ch01: 61326562-61336377 Solanum tuberosum
PGSC0003DMG400033114 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 61335878-61336377 Solanum tuberosum
PGSC0003DMG400033114 0.5kb downstream 0.5kb downstream 9816 true ST4.03ch01: 61326062-61335877 Solanum tuberosum
PGSC0003DMG400033114 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 61326062-61326561 Solanum tuberosum
PGSC0003DMG400033114 1.0kb upstream 1.0kb upstream 10316 true ST4.03ch01: 61326562-61336877 Solanum tuberosum
PGSC0003DMG400033114 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 61335878-61336877 Solanum tuberosum
PGSC0003DMG400033114 1.0kb downstream 1.0kb downstream 10316 true ST4.03ch01: 61325562-61335877 Solanum tuberosum
PGSC0003DMG400033114 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 61325562-61326561 Solanum tuberosum
PGSC0003DMG400033114 2.0kb upstream 2.0kb upstream 11316 true ST4.03ch01: 61326562-61337877 Solanum tuberosum
PGSC0003DMG400033114 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 61335878-61337877 Solanum tuberosum
PGSC0003DMG400033114 2.0kb downstream 2.0kb downstream 11316 true ST4.03ch01: 61324562-61335877 Solanum tuberosum
PGSC0003DMG400033114 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 61324562-61326561 Solanum tuberosum
PGSC0003DMG400033114 5.0kb upstream 5.0kb upstream 14316 true ST4.03ch01: 61326562-61340877 Solanum tuberosum
PGSC0003DMG400033114 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 61335878-61340877 Solanum tuberosum
PGSC0003DMG400033114 5.0kb downstream 5.0kb downstream 14316 true ST4.03ch01: 61321562-61335877 Solanum tuberosum
PGSC0003DMG400033114 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 61321562-61326561 Solanum tuberosum
PGSC0003DMG400033114 10.0kb upstream 10.0kb upstream 19316 true ST4.03ch01: 61326562-61345877 Solanum tuberosum
PGSC0003DMG400033114 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 61335878-61345877 Solanum tuberosum
PGSC0003DMG400033114 10.0kb downstream 10.0kb downstream 19316 true ST4.03ch01: 61316562-61335877 Solanum tuberosum
PGSC0003DMG400033114 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 61316562-61326561 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467474 5263 Asterids View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain