Gene : PGSC0003DMG400001105 S. tuberosum v4.03
Defline:  (1 of 1) K04716 - sphingosine-1-phosphate phosphatase 1 (SGPP1) Genomic Order:  721
Name:  ? PGSC0003DMG400001105 Secondary Identifier:  ? PAC:37464097
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-6453 Solanum tuberosum pathologic  
Stuberosum TRIGLSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400001105 0.5kb upstream 0.5kb upstream 4461 true ST4.03ch03: 14142739-14147199 Solanum tuberosum
PGSC0003DMG400001105 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 14146700-14147199 Solanum tuberosum
PGSC0003DMG400001105 0.5kb downstream 0.5kb downstream 4461 true ST4.03ch03: 14142239-14146699 Solanum tuberosum
PGSC0003DMG400001105 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 14142239-14142738 Solanum tuberosum
PGSC0003DMG400001105 1.0kb upstream 1.0kb upstream 4961 true ST4.03ch03: 14142739-14147699 Solanum tuberosum
PGSC0003DMG400001105 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 14146700-14147699 Solanum tuberosum
PGSC0003DMG400001105 1.0kb downstream 1.0kb downstream 4961 true ST4.03ch03: 14141739-14146699 Solanum tuberosum
PGSC0003DMG400001105 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 14141739-14142738 Solanum tuberosum
PGSC0003DMG400001105 2.0kb upstream 2.0kb upstream 5961 true ST4.03ch03: 14142739-14148699 Solanum tuberosum
PGSC0003DMG400001105 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 14146700-14148699 Solanum tuberosum
PGSC0003DMG400001105 2.0kb downstream 2.0kb downstream 5961 true ST4.03ch03: 14140739-14146699 Solanum tuberosum
PGSC0003DMG400001105 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 14140739-14142738 Solanum tuberosum
PGSC0003DMG400001105 5.0kb upstream 5.0kb upstream 8961 true ST4.03ch03: 14142739-14151699 Solanum tuberosum
PGSC0003DMG400001105 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 14146700-14151699 Solanum tuberosum
PGSC0003DMG400001105 5.0kb downstream 5.0kb downstream 8961 true ST4.03ch03: 14137739-14146699 Solanum tuberosum
PGSC0003DMG400001105 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 14137739-14142738 Solanum tuberosum
PGSC0003DMG400001105 10.0kb upstream 10.0kb upstream 13961 true ST4.03ch03: 14142739-14156699 Solanum tuberosum
PGSC0003DMG400001105 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 14146700-14156699 Solanum tuberosum
PGSC0003DMG400001105 10.0kb downstream 10.0kb downstream 13961 true ST4.03ch03: 14132739-14146699 Solanum tuberosum
PGSC0003DMG400001105 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 14132739-14142738 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472782 5263 Asterids View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain