Gene : PGSC0003DMG400002513 S. tuberosum v4.03

Defline:  (1 of 1) 2.1.1.189//2.1.1.190 - 23S rRNA (uracil(747)-C(5))-methyltransferase // 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  3434
Name:  ? PGSC0003DMG400002513 Secondary Identifier:  ? PAC:37461704

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400002513 0.5kb upstream 0.5kb upstream 6533 true ST4.03ch03: 60658382-60664914 Solanum tuberosum
PGSC0003DMG400002513 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 60664415-60664914 Solanum tuberosum
PGSC0003DMG400002513 0.5kb downstream 0.5kb downstream 6533 true ST4.03ch03: 60657882-60664414 Solanum tuberosum
PGSC0003DMG400002513 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 60657882-60658381 Solanum tuberosum
PGSC0003DMG400002513 1.0kb upstream 1.0kb upstream 7033 true ST4.03ch03: 60658382-60665414 Solanum tuberosum
PGSC0003DMG400002513 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 60664415-60665414 Solanum tuberosum
PGSC0003DMG400002513 1.0kb downstream 1.0kb downstream 7033 true ST4.03ch03: 60657382-60664414 Solanum tuberosum
PGSC0003DMG400002513 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 60657382-60658381 Solanum tuberosum
PGSC0003DMG400002513 2.0kb upstream 2.0kb upstream 8033 true ST4.03ch03: 60658382-60666414 Solanum tuberosum
PGSC0003DMG400002513 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 60664415-60666414 Solanum tuberosum
PGSC0003DMG400002513 2.0kb downstream 2.0kb downstream 8033 true ST4.03ch03: 60656382-60664414 Solanum tuberosum
PGSC0003DMG400002513 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 60656382-60658381 Solanum tuberosum
PGSC0003DMG400002513 5.0kb upstream 5.0kb upstream 11033 true ST4.03ch03: 60658382-60669414 Solanum tuberosum
PGSC0003DMG400002513 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 60664415-60669414 Solanum tuberosum
PGSC0003DMG400002513 5.0kb downstream 5.0kb downstream 11033 true ST4.03ch03: 60653382-60664414 Solanum tuberosum
PGSC0003DMG400002513 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 60653382-60658381 Solanum tuberosum
PGSC0003DMG400002513 10.0kb upstream 10.0kb upstream 16033 true ST4.03ch03: 60658382-60674414 Solanum tuberosum
PGSC0003DMG400002513 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 60664415-60674414 Solanum tuberosum
PGSC0003DMG400002513 10.0kb downstream 10.0kb downstream 16033 true ST4.03ch03: 60648382-60664414 Solanum tuberosum
PGSC0003DMG400002513 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 60648382-60658381 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468364 5263 Asterids View MSA
123737477 5271 Pentapetalae View MSA
122788250 5272 Eudicot View MSA
122042152 5273 Angiosperm View MSA
121345091 5274 Embryophyte View MSA
123424748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain