Gene : PGSC0003DMG400002522 S. tuberosum v4.03

Defline:  (1 of 48) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3415
Name:  ? PGSC0003DMG400002522 Secondary Identifier:  ? PAC:37463883

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400002522 0.5kb upstream 0.5kb upstream 3586 true ST4.03ch03: 60544945-60548530 Solanum tuberosum
PGSC0003DMG400002522 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 60548031-60548530 Solanum tuberosum
PGSC0003DMG400002522 0.5kb downstream 0.5kb downstream 3586 true ST4.03ch03: 60544445-60548030 Solanum tuberosum
PGSC0003DMG400002522 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 60544445-60544944 Solanum tuberosum
PGSC0003DMG400002522 1.0kb upstream 1.0kb upstream 4086 true ST4.03ch03: 60544945-60549030 Solanum tuberosum
PGSC0003DMG400002522 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 60548031-60549030 Solanum tuberosum
PGSC0003DMG400002522 1.0kb downstream 1.0kb downstream 4086 true ST4.03ch03: 60543945-60548030 Solanum tuberosum
PGSC0003DMG400002522 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 60543945-60544944 Solanum tuberosum
PGSC0003DMG400002522 2.0kb upstream 2.0kb upstream 5086 true ST4.03ch03: 60544945-60550030 Solanum tuberosum
PGSC0003DMG400002522 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 60548031-60550030 Solanum tuberosum
PGSC0003DMG400002522 2.0kb downstream 2.0kb downstream 5086 true ST4.03ch03: 60542945-60548030 Solanum tuberosum
PGSC0003DMG400002522 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 60542945-60544944 Solanum tuberosum
PGSC0003DMG400002522 5.0kb upstream 5.0kb upstream 8086 true ST4.03ch03: 60544945-60553030 Solanum tuberosum
PGSC0003DMG400002522 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 60548031-60553030 Solanum tuberosum
PGSC0003DMG400002522 5.0kb downstream 5.0kb downstream 8086 true ST4.03ch03: 60539945-60548030 Solanum tuberosum
PGSC0003DMG400002522 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 60539945-60544944 Solanum tuberosum
PGSC0003DMG400002522 10.0kb upstream 10.0kb upstream 13086 true ST4.03ch03: 60544945-60558030 Solanum tuberosum
PGSC0003DMG400002522 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 60548031-60558030 Solanum tuberosum
PGSC0003DMG400002522 10.0kb downstream 10.0kb downstream 13086 true ST4.03ch03: 60534945-60548030 Solanum tuberosum
PGSC0003DMG400002522 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 60534945-60544944 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472904 5263 Asterids View MSA
123739783 5271 Pentapetalae View MSA
122791645 5272 Eudicot View MSA
122041926 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain