Gene : PGSC0003DMG400009077 S. tuberosum v4.03
Defline:  (1 of 3) K00797 - spermidine synthase (speE, SRM) Genomic Order:  1924
Name:  ? PGSC0003DMG400009077 Secondary Identifier:  ? PAC:37459530
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum BSUBPOLYAMSYN-PWY Solanum tuberosum pathologic  
Stuberosum POLYAMINSYN3-PWY Solanum tuberosum pathologic  
Stuberosum PWY-7528 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400009077 0.5kb upstream 0.5kb upstream 6679 true ST4.03ch03: 45114349-45121027 Solanum tuberosum
PGSC0003DMG400009077 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 45114349-45114848 Solanum tuberosum
PGSC0003DMG400009077 0.5kb downstream 0.5kb downstream 6679 true ST4.03ch03: 45114849-45121527 Solanum tuberosum
PGSC0003DMG400009077 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 45121028-45121527 Solanum tuberosum
PGSC0003DMG400009077 1.0kb upstream 1.0kb upstream 7179 true ST4.03ch03: 45113849-45121027 Solanum tuberosum
PGSC0003DMG400009077 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 45113849-45114848 Solanum tuberosum
PGSC0003DMG400009077 1.0kb downstream 1.0kb downstream 7179 true ST4.03ch03: 45114849-45122027 Solanum tuberosum
PGSC0003DMG400009077 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 45121028-45122027 Solanum tuberosum
PGSC0003DMG400009077 2.0kb upstream 2.0kb upstream 8179 true ST4.03ch03: 45112849-45121027 Solanum tuberosum
PGSC0003DMG400009077 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 45112849-45114848 Solanum tuberosum
PGSC0003DMG400009077 2.0kb downstream 2.0kb downstream 8179 true ST4.03ch03: 45114849-45123027 Solanum tuberosum
PGSC0003DMG400009077 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 45121028-45123027 Solanum tuberosum
PGSC0003DMG400009077 5.0kb upstream 5.0kb upstream 11179 true ST4.03ch03: 45109849-45121027 Solanum tuberosum
PGSC0003DMG400009077 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 45109849-45114848 Solanum tuberosum
PGSC0003DMG400009077 5.0kb downstream 5.0kb downstream 11179 true ST4.03ch03: 45114849-45126027 Solanum tuberosum
PGSC0003DMG400009077 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 45121028-45126027 Solanum tuberosum
PGSC0003DMG400009077 10.0kb upstream 10.0kb upstream 16179 true ST4.03ch03: 45104849-45121027 Solanum tuberosum
PGSC0003DMG400009077 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 45104849-45114848 Solanum tuberosum
PGSC0003DMG400009077 10.0kb downstream 10.0kb downstream 16179 true ST4.03ch03: 45114849-45131027 Solanum tuberosum
PGSC0003DMG400009077 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 45121028-45131027 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473129 5263 Asterids View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain