Gene : PGSC0003DMG400009084 S. tuberosum v4.03

Defline:  (1 of 48) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1950
Name:  ? PGSC0003DMG400009084 Secondary Identifier:  ? PAC:37459515

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400009084 0.5kb upstream 0.5kb upstream 2459 true ST4.03ch03: 45473610-45476068 Solanum tuberosum
PGSC0003DMG400009084 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 45473610-45474109 Solanum tuberosum
PGSC0003DMG400009084 0.5kb downstream 0.5kb downstream 2459 true ST4.03ch03: 45474110-45476568 Solanum tuberosum
PGSC0003DMG400009084 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 45476069-45476568 Solanum tuberosum
PGSC0003DMG400009084 1.0kb upstream 1.0kb upstream 2959 true ST4.03ch03: 45473110-45476068 Solanum tuberosum
PGSC0003DMG400009084 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 45473110-45474109 Solanum tuberosum
PGSC0003DMG400009084 1.0kb downstream 1.0kb downstream 2959 true ST4.03ch03: 45474110-45477068 Solanum tuberosum
PGSC0003DMG400009084 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 45476069-45477068 Solanum tuberosum
PGSC0003DMG400009084 2.0kb upstream 2.0kb upstream 3959 true ST4.03ch03: 45472110-45476068 Solanum tuberosum
PGSC0003DMG400009084 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 45472110-45474109 Solanum tuberosum
PGSC0003DMG400009084 2.0kb downstream 2.0kb downstream 3959 true ST4.03ch03: 45474110-45478068 Solanum tuberosum
PGSC0003DMG400009084 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 45476069-45478068 Solanum tuberosum
PGSC0003DMG400009084 5.0kb upstream 5.0kb upstream 6959 true ST4.03ch03: 45469110-45476068 Solanum tuberosum
PGSC0003DMG400009084 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 45469110-45474109 Solanum tuberosum
PGSC0003DMG400009084 5.0kb downstream 5.0kb downstream 6959 true ST4.03ch03: 45474110-45481068 Solanum tuberosum
PGSC0003DMG400009084 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 45476069-45481068 Solanum tuberosum
PGSC0003DMG400009084 10.0kb upstream 10.0kb upstream 11959 true ST4.03ch03: 45464110-45476068 Solanum tuberosum
PGSC0003DMG400009084 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 45464110-45474109 Solanum tuberosum
PGSC0003DMG400009084 10.0kb downstream 10.0kb downstream 11959 true ST4.03ch03: 45474110-45486068 Solanum tuberosum
PGSC0003DMG400009084 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 45476069-45486068 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471048 5263 Asterids View MSA
123738847 5271 Pentapetalae View MSA
122790244 5272 Eudicot View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain