Gene : PGSC0003DMG400005646 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11476//PTHR11476:SF5 - HISTIDYL-TRNA SYNTHETASE // CLASS II AARS AND BIOTIN SYNTHETASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  3217
Name:  ? PGSC0003DMG400005646 Secondary Identifier:  ? PAC:37459498
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400005646 0.5kb upstream 0.5kb upstream 6551 true ST4.03ch03: 58805263-58811813 Solanum tuberosum
PGSC0003DMG400005646 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 58811314-58811813 Solanum tuberosum
PGSC0003DMG400005646 0.5kb downstream 0.5kb downstream 6551 true ST4.03ch03: 58804763-58811313 Solanum tuberosum
PGSC0003DMG400005646 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 58804763-58805262 Solanum tuberosum
PGSC0003DMG400005646 1.0kb upstream 1.0kb upstream 7051 true ST4.03ch03: 58805263-58812313 Solanum tuberosum
PGSC0003DMG400005646 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 58811314-58812313 Solanum tuberosum
PGSC0003DMG400005646 1.0kb downstream 1.0kb downstream 7051 true ST4.03ch03: 58804263-58811313 Solanum tuberosum
PGSC0003DMG400005646 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 58804263-58805262 Solanum tuberosum
PGSC0003DMG400005646 2.0kb upstream 2.0kb upstream 8051 true ST4.03ch03: 58805263-58813313 Solanum tuberosum
PGSC0003DMG400005646 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 58811314-58813313 Solanum tuberosum
PGSC0003DMG400005646 2.0kb downstream 2.0kb downstream 8051 true ST4.03ch03: 58803263-58811313 Solanum tuberosum
PGSC0003DMG400005646 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 58803263-58805262 Solanum tuberosum
PGSC0003DMG400005646 5.0kb upstream 5.0kb upstream 11051 true ST4.03ch03: 58805263-58816313 Solanum tuberosum
PGSC0003DMG400005646 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 58811314-58816313 Solanum tuberosum
PGSC0003DMG400005646 5.0kb downstream 5.0kb downstream 11051 true ST4.03ch03: 58800263-58811313 Solanum tuberosum
PGSC0003DMG400005646 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 58800263-58805262 Solanum tuberosum
PGSC0003DMG400005646 10.0kb upstream 10.0kb upstream 16051 true ST4.03ch03: 58805263-58821313 Solanum tuberosum
PGSC0003DMG400005646 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 58811314-58821313 Solanum tuberosum
PGSC0003DMG400005646 10.0kb downstream 10.0kb downstream 16051 true ST4.03ch03: 58795263-58811313 Solanum tuberosum
PGSC0003DMG400005646 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 58795263-58805262 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472475 5263 Asterids View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain