Gene : PGSC0003DMG400024484 S. tuberosum v4.03

Defline:  (1 of 2) PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Genomic Order:  2693
Name:  ? PGSC0003DMG400024484 Secondary Identifier:  ? PAC:37460862

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400024484 0.5kb upstream 0.5kb upstream 7264 true ST4.03ch03: 54027018-54034281 Solanum tuberosum
PGSC0003DMG400024484 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 54027018-54027517 Solanum tuberosum
PGSC0003DMG400024484 0.5kb downstream 0.5kb downstream 7264 true ST4.03ch03: 54027518-54034781 Solanum tuberosum
PGSC0003DMG400024484 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 54034282-54034781 Solanum tuberosum
PGSC0003DMG400024484 1.0kb upstream 1.0kb upstream 7764 true ST4.03ch03: 54026518-54034281 Solanum tuberosum
PGSC0003DMG400024484 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 54026518-54027517 Solanum tuberosum
PGSC0003DMG400024484 1.0kb downstream 1.0kb downstream 7764 true ST4.03ch03: 54027518-54035281 Solanum tuberosum
PGSC0003DMG400024484 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 54034282-54035281 Solanum tuberosum
PGSC0003DMG400024484 2.0kb upstream 2.0kb upstream 8764 true ST4.03ch03: 54025518-54034281 Solanum tuberosum
PGSC0003DMG400024484 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 54025518-54027517 Solanum tuberosum
PGSC0003DMG400024484 2.0kb downstream 2.0kb downstream 8764 true ST4.03ch03: 54027518-54036281 Solanum tuberosum
PGSC0003DMG400024484 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 54034282-54036281 Solanum tuberosum
PGSC0003DMG400024484 5.0kb upstream 5.0kb upstream 11764 true ST4.03ch03: 54022518-54034281 Solanum tuberosum
PGSC0003DMG400024484 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 54022518-54027517 Solanum tuberosum
PGSC0003DMG400024484 5.0kb downstream 5.0kb downstream 11764 true ST4.03ch03: 54027518-54039281 Solanum tuberosum
PGSC0003DMG400024484 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 54034282-54039281 Solanum tuberosum
PGSC0003DMG400024484 10.0kb upstream 10.0kb upstream 16764 true ST4.03ch03: 54017518-54034281 Solanum tuberosum
PGSC0003DMG400024484 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 54017518-54027517 Solanum tuberosum
PGSC0003DMG400024484 10.0kb downstream 10.0kb downstream 16764 true ST4.03ch03: 54027518-54044281 Solanum tuberosum
PGSC0003DMG400024484 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 54034282-54044281 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479353 5263 Asterids View MSA
123751253 5271 Pentapetalae View MSA
122792090 5272 Eudicot View MSA
122044388 5273 Angiosperm View MSA
121350650 5274 Embryophyte View MSA
123381837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain