Gene : PGSC0003DMG401024557 S. tuberosum v4.03
Defline:  (1 of 2) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1) Genomic Order:  2868
Name:  ? PGSC0003DMG401024557 Secondary Identifier:  ? PAC:37459576
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ARGSYNBSUB-PWY Solanum tuberosum pathologic  
Stuberosum ARGSYN-PWY Solanum tuberosum pathologic  
Stuberosum GLUTAMINDEG-PWY Solanum tuberosum pathologic  
Stuberosum PWY0-162 Solanum tuberosum pathologic  
Stuberosum PWY-4984 Solanum tuberosum pathologic  
Stuberosum PWY-5686 Solanum tuberosum pathologic  
Stuberosum PWY-7211 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG401024557 0.5kb upstream 0.5kb upstream 5162 true ST4.03ch03: 55564057-55569218 Solanum tuberosum
PGSC0003DMG401024557 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 55564057-55564556 Solanum tuberosum
PGSC0003DMG401024557 0.5kb downstream 0.5kb downstream 5162 true ST4.03ch03: 55564557-55569718 Solanum tuberosum
PGSC0003DMG401024557 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 55569219-55569718 Solanum tuberosum
PGSC0003DMG401024557 1.0kb upstream 1.0kb upstream 5662 true ST4.03ch03: 55563557-55569218 Solanum tuberosum
PGSC0003DMG401024557 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 55563557-55564556 Solanum tuberosum
PGSC0003DMG401024557 1.0kb downstream 1.0kb downstream 5662 true ST4.03ch03: 55564557-55570218 Solanum tuberosum
PGSC0003DMG401024557 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 55569219-55570218 Solanum tuberosum
PGSC0003DMG401024557 2.0kb upstream 2.0kb upstream 6662 true ST4.03ch03: 55562557-55569218 Solanum tuberosum
PGSC0003DMG401024557 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 55562557-55564556 Solanum tuberosum
PGSC0003DMG401024557 2.0kb downstream 2.0kb downstream 6662 true ST4.03ch03: 55564557-55571218 Solanum tuberosum
PGSC0003DMG401024557 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 55569219-55571218 Solanum tuberosum
PGSC0003DMG401024557 5.0kb upstream 5.0kb upstream 9662 true ST4.03ch03: 55559557-55569218 Solanum tuberosum
PGSC0003DMG401024557 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 55559557-55564556 Solanum tuberosum
PGSC0003DMG401024557 5.0kb downstream 5.0kb downstream 9662 true ST4.03ch03: 55564557-55574218 Solanum tuberosum
PGSC0003DMG401024557 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 55569219-55574218 Solanum tuberosum
PGSC0003DMG401024557 10.0kb upstream 10.0kb upstream 14662 true ST4.03ch03: 55554557-55569218 Solanum tuberosum
PGSC0003DMG401024557 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 55554557-55564556 Solanum tuberosum
PGSC0003DMG401024557 10.0kb downstream 10.0kb downstream 14662 true ST4.03ch03: 55564557-55579218 Solanum tuberosum
PGSC0003DMG401024557 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 55569219-55579218 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480571 5263 Asterids View MSA
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain