Gene : PGSC0003DMG400017338 S. tuberosum v4.03
Defline:  (1 of 3) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  2086
Name:  ? PGSC0003DMG400017338 Secondary Identifier:  ? PAC:37433710
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum GLYOXYLATE-BYPASS Solanum tuberosum pathologic  
Stuberosum PWY-5464 Solanum tuberosum pathologic  
Stuberosum PWY-561 Solanum tuberosum pathologic  
Stuberosum PWY-5690 Solanum tuberosum pathologic  
Stuberosum PWY-6549 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400017338 0.5kb upstream 0.5kb upstream 7702 true ST4.03ch07: 50925155-50932856 Solanum tuberosum
PGSC0003DMG400017338 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 50932357-50932856 Solanum tuberosum
PGSC0003DMG400017338 0.5kb downstream 0.5kb downstream 7702 true ST4.03ch07: 50924655-50932356 Solanum tuberosum
PGSC0003DMG400017338 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 50924655-50925154 Solanum tuberosum
PGSC0003DMG400017338 1.0kb upstream 1.0kb upstream 8202 true ST4.03ch07: 50925155-50933356 Solanum tuberosum
PGSC0003DMG400017338 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 50932357-50933356 Solanum tuberosum
PGSC0003DMG400017338 1.0kb downstream 1.0kb downstream 8202 true ST4.03ch07: 50924155-50932356 Solanum tuberosum
PGSC0003DMG400017338 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 50924155-50925154 Solanum tuberosum
PGSC0003DMG400017338 2.0kb upstream 2.0kb upstream 9202 true ST4.03ch07: 50925155-50934356 Solanum tuberosum
PGSC0003DMG400017338 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 50932357-50934356 Solanum tuberosum
PGSC0003DMG400017338 2.0kb downstream 2.0kb downstream 9202 true ST4.03ch07: 50923155-50932356 Solanum tuberosum
PGSC0003DMG400017338 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 50923155-50925154 Solanum tuberosum
PGSC0003DMG400017338 5.0kb upstream 5.0kb upstream 12202 true ST4.03ch07: 50925155-50937356 Solanum tuberosum
PGSC0003DMG400017338 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 50932357-50937356 Solanum tuberosum
PGSC0003DMG400017338 5.0kb downstream 5.0kb downstream 12202 true ST4.03ch07: 50920155-50932356 Solanum tuberosum
PGSC0003DMG400017338 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 50920155-50925154 Solanum tuberosum
PGSC0003DMG400017338 10.0kb upstream 10.0kb upstream 17202 true ST4.03ch07: 50925155-50942356 Solanum tuberosum
PGSC0003DMG400017338 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 50932357-50942356 Solanum tuberosum
PGSC0003DMG400017338 10.0kb downstream 10.0kb downstream 17202 true ST4.03ch07: 50915155-50932356 Solanum tuberosum
PGSC0003DMG400017338 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 50915155-50925154 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386912 5263 Asterids View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain