Gene : PGSC0003DMG400022118 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2704
Name:  ? PGSC0003DMG400022118 Secondary Identifier:  ? PAC:37433749
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ANAEROFRUCAT-PWY Solanum tuberosum pathologic  
Stuberosum ANAGLYCOLYSIS-PWY Solanum tuberosum pathologic  
Stuberosum CALVIN-PWY Solanum tuberosum pathologic  
Stuberosum GLUCONEO-PWY Solanum tuberosum pathologic  
Stuberosum PHOTOALL-PWY Solanum tuberosum pathologic  
Stuberosum PWY-1042 Solanum tuberosum pathologic  
Stuberosum PWY-5464 Solanum tuberosum pathologic  
Stuberosum SUCSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400022118 0.5kb upstream 0.5kb upstream 2578 true ST4.03ch07: 56628258-56630835 Solanum tuberosum
PGSC0003DMG400022118 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 56630336-56630835 Solanum tuberosum
PGSC0003DMG400022118 0.5kb downstream 0.5kb downstream 2578 true ST4.03ch07: 56627758-56630335 Solanum tuberosum
PGSC0003DMG400022118 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 56627758-56628257 Solanum tuberosum
PGSC0003DMG400022118 1.0kb upstream 1.0kb upstream 3078 true ST4.03ch07: 56628258-56631335 Solanum tuberosum
PGSC0003DMG400022118 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 56630336-56631335 Solanum tuberosum
PGSC0003DMG400022118 1.0kb downstream 1.0kb downstream 3078 true ST4.03ch07: 56627258-56630335 Solanum tuberosum
PGSC0003DMG400022118 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 56627258-56628257 Solanum tuberosum
PGSC0003DMG400022118 2.0kb upstream 2.0kb upstream 4078 true ST4.03ch07: 56628258-56632335 Solanum tuberosum
PGSC0003DMG400022118 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 56630336-56632335 Solanum tuberosum
PGSC0003DMG400022118 2.0kb downstream 2.0kb downstream 4078 true ST4.03ch07: 56626258-56630335 Solanum tuberosum
PGSC0003DMG400022118 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 56626258-56628257 Solanum tuberosum
PGSC0003DMG400022118 5.0kb upstream 5.0kb upstream 7078 true ST4.03ch07: 56628258-56635335 Solanum tuberosum
PGSC0003DMG400022118 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 56630336-56635335 Solanum tuberosum
PGSC0003DMG400022118 5.0kb downstream 5.0kb downstream 7078 true ST4.03ch07: 56623258-56630335 Solanum tuberosum
PGSC0003DMG400022118 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 56623258-56628257 Solanum tuberosum
PGSC0003DMG400022118 10.0kb upstream 10.0kb upstream 12078 true ST4.03ch07: 56628258-56640335 Solanum tuberosum
PGSC0003DMG400022118 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 56630336-56640335 Solanum tuberosum
PGSC0003DMG400022118 10.0kb downstream 10.0kb downstream 12078 true ST4.03ch07: 56618258-56630335 Solanum tuberosum
PGSC0003DMG400022118 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 56618258-56628257 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470404 5263 Asterids View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain