Gene : PGSC0003DMG400020416 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2026
Name:  ? PGSC0003DMG400020416 Secondary Identifier:  ? PAC:37434269
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ASPARTATE-DEG1-PWY Solanum tuberosum pathologic  
Stuberosum ASPARTATESYN-PWY Solanum tuberosum pathologic  
Stuberosum PWY-3001 Solanum tuberosum pathologic  
Stuberosum PWY-7115 Solanum tuberosum pathologic  
Stuberosum PWY-7117 Solanum tuberosum pathologic  
Stuberosum THRESYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400020416 0.5kb upstream 0.5kb upstream 4676 true ST4.03ch07: 50331412-50336087 Solanum tuberosum
PGSC0003DMG400020416 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 50335588-50336087 Solanum tuberosum
PGSC0003DMG400020416 0.5kb downstream 0.5kb downstream 4676 true ST4.03ch07: 50330912-50335587 Solanum tuberosum
PGSC0003DMG400020416 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 50330912-50331411 Solanum tuberosum
PGSC0003DMG400020416 1.0kb upstream 1.0kb upstream 5176 true ST4.03ch07: 50331412-50336587 Solanum tuberosum
PGSC0003DMG400020416 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 50335588-50336587 Solanum tuberosum
PGSC0003DMG400020416 1.0kb downstream 1.0kb downstream 5176 true ST4.03ch07: 50330412-50335587 Solanum tuberosum
PGSC0003DMG400020416 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 50330412-50331411 Solanum tuberosum
PGSC0003DMG400020416 2.0kb upstream 2.0kb upstream 6176 true ST4.03ch07: 50331412-50337587 Solanum tuberosum
PGSC0003DMG400020416 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 50335588-50337587 Solanum tuberosum
PGSC0003DMG400020416 2.0kb downstream 2.0kb downstream 6176 true ST4.03ch07: 50329412-50335587 Solanum tuberosum
PGSC0003DMG400020416 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 50329412-50331411 Solanum tuberosum
PGSC0003DMG400020416 5.0kb upstream 5.0kb upstream 9176 true ST4.03ch07: 50331412-50340587 Solanum tuberosum
PGSC0003DMG400020416 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 50335588-50340587 Solanum tuberosum
PGSC0003DMG400020416 5.0kb downstream 5.0kb downstream 9176 true ST4.03ch07: 50326412-50335587 Solanum tuberosum
PGSC0003DMG400020416 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 50326412-50331411 Solanum tuberosum
PGSC0003DMG400020416 10.0kb upstream 10.0kb upstream 14176 true ST4.03ch07: 50331412-50345587 Solanum tuberosum
PGSC0003DMG400020416 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 50335588-50345587 Solanum tuberosum
PGSC0003DMG400020416 10.0kb downstream 10.0kb downstream 14176 true ST4.03ch07: 50321412-50335587 Solanum tuberosum
PGSC0003DMG400020416 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 50321412-50331411 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481149 5263 Asterids View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain