Gene : PGSC0003DMG400028753 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11946//PTHR11946:SF78 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // SUBFAMILY NOT NAMED Genomic Order:  454
Name:  ? PGSC0003DMG400028753 Secondary Identifier:  ? PAC:37431288
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400028753 0.5kb upstream 0.5kb upstream 10463 true ST4.03ch07: 6696167-6706629 Solanum tuberosum
PGSC0003DMG400028753 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 6706130-6706629 Solanum tuberosum
PGSC0003DMG400028753 0.5kb downstream 0.5kb downstream 10463 true ST4.03ch07: 6695667-6706129 Solanum tuberosum
PGSC0003DMG400028753 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 6695667-6696166 Solanum tuberosum
PGSC0003DMG400028753 1.0kb upstream 1.0kb upstream 10963 true ST4.03ch07: 6696167-6707129 Solanum tuberosum
PGSC0003DMG400028753 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 6706130-6707129 Solanum tuberosum
PGSC0003DMG400028753 1.0kb downstream 1.0kb downstream 10963 true ST4.03ch07: 6695167-6706129 Solanum tuberosum
PGSC0003DMG400028753 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 6695167-6696166 Solanum tuberosum
PGSC0003DMG400028753 2.0kb upstream 2.0kb upstream 11963 true ST4.03ch07: 6696167-6708129 Solanum tuberosum
PGSC0003DMG400028753 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 6706130-6708129 Solanum tuberosum
PGSC0003DMG400028753 2.0kb downstream 2.0kb downstream 11963 true ST4.03ch07: 6694167-6706129 Solanum tuberosum
PGSC0003DMG400028753 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 6694167-6696166 Solanum tuberosum
PGSC0003DMG400028753 5.0kb upstream 5.0kb upstream 14963 true ST4.03ch07: 6696167-6711129 Solanum tuberosum
PGSC0003DMG400028753 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 6706130-6711129 Solanum tuberosum
PGSC0003DMG400028753 5.0kb downstream 5.0kb downstream 14963 true ST4.03ch07: 6691167-6706129 Solanum tuberosum
PGSC0003DMG400028753 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 6691167-6696166 Solanum tuberosum
PGSC0003DMG400028753 10.0kb upstream 10.0kb upstream 19963 true ST4.03ch07: 6696167-6716129 Solanum tuberosum
PGSC0003DMG400028753 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 6706130-6716129 Solanum tuberosum
PGSC0003DMG400028753 10.0kb downstream 10.0kb downstream 19963 true ST4.03ch07: 6686167-6706129 Solanum tuberosum
PGSC0003DMG400028753 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 6686167-6696166 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474790 5263 Asterids View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain