Gene : PGSC0003DMG400027633 S. tuberosum v4.03
Defline:  (1 of 1) PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Genomic Order:  2158
Name:  ? PGSC0003DMG400027633 Secondary Identifier:  ? PAC:37434679
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-695 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400027633 0.5kb upstream 0.5kb upstream 2021 true ST4.03ch07: 51779213-51781233 Solanum tuberosum
PGSC0003DMG400027633 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 51780734-51781233 Solanum tuberosum
PGSC0003DMG400027633 0.5kb downstream 0.5kb downstream 2021 true ST4.03ch07: 51778713-51780733 Solanum tuberosum
PGSC0003DMG400027633 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 51778713-51779212 Solanum tuberosum
PGSC0003DMG400027633 1.0kb upstream 1.0kb upstream 2521 true ST4.03ch07: 51779213-51781733 Solanum tuberosum
PGSC0003DMG400027633 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 51780734-51781733 Solanum tuberosum
PGSC0003DMG400027633 1.0kb downstream 1.0kb downstream 2521 true ST4.03ch07: 51778213-51780733 Solanum tuberosum
PGSC0003DMG400027633 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 51778213-51779212 Solanum tuberosum
PGSC0003DMG400027633 2.0kb upstream 2.0kb upstream 3521 true ST4.03ch07: 51779213-51782733 Solanum tuberosum
PGSC0003DMG400027633 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 51780734-51782733 Solanum tuberosum
PGSC0003DMG400027633 2.0kb downstream 2.0kb downstream 3521 true ST4.03ch07: 51777213-51780733 Solanum tuberosum
PGSC0003DMG400027633 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 51777213-51779212 Solanum tuberosum
PGSC0003DMG400027633 5.0kb upstream 5.0kb upstream 6521 true ST4.03ch07: 51779213-51785733 Solanum tuberosum
PGSC0003DMG400027633 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 51780734-51785733 Solanum tuberosum
PGSC0003DMG400027633 5.0kb downstream 5.0kb downstream 6521 true ST4.03ch07: 51774213-51780733 Solanum tuberosum
PGSC0003DMG400027633 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 51774213-51779212 Solanum tuberosum
PGSC0003DMG400027633 10.0kb upstream 10.0kb upstream 11521 true ST4.03ch07: 51779213-51790733 Solanum tuberosum
PGSC0003DMG400027633 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 51780734-51790733 Solanum tuberosum
PGSC0003DMG400027633 10.0kb downstream 10.0kb downstream 11521 true ST4.03ch07: 51769213-51780733 Solanum tuberosum
PGSC0003DMG400027633 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 51769213-51779212 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480927 5263 Asterids View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain