Gene : PGSC0003DMG400007081 S. tuberosum v4.03
Defline:  (1 of 1) 2.5.1.90 - All-trans-octaprenyl-diphosphate synthase / Trans-prenyltransferase Genomic Order:  2196
Name:  ? PGSC0003DMG400007081 Secondary Identifier:  ? PAC:37434845
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum HEXPPSYN-PWY Solanum tuberosum pathologic  
Stuberosum PWY-5120 Solanum tuberosum pathologic  
Stuberosum PWY-5783 Solanum tuberosum pathologic  
Stuberosum PWY-5805 Solanum tuberosum pathologic  
Stuberosum PWY-5807 Solanum tuberosum pathologic  
Stuberosum PWY-5864 Solanum tuberosum pathologic  
Stuberosum PWY-5910 Solanum tuberosum pathologic  
Stuberosum PWY-6520 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400007081 0.5kb upstream 0.5kb upstream 4535 true ST4.03ch07: 52191119-52195653 Solanum tuberosum
PGSC0003DMG400007081 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 52195154-52195653 Solanum tuberosum
PGSC0003DMG400007081 0.5kb downstream 0.5kb downstream 4535 true ST4.03ch07: 52190619-52195153 Solanum tuberosum
PGSC0003DMG400007081 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 52190619-52191118 Solanum tuberosum
PGSC0003DMG400007081 1.0kb upstream 1.0kb upstream 5035 true ST4.03ch07: 52191119-52196153 Solanum tuberosum
PGSC0003DMG400007081 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 52195154-52196153 Solanum tuberosum
PGSC0003DMG400007081 1.0kb downstream 1.0kb downstream 5035 true ST4.03ch07: 52190119-52195153 Solanum tuberosum
PGSC0003DMG400007081 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 52190119-52191118 Solanum tuberosum
PGSC0003DMG400007081 2.0kb upstream 2.0kb upstream 6035 true ST4.03ch07: 52191119-52197153 Solanum tuberosum
PGSC0003DMG400007081 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 52195154-52197153 Solanum tuberosum
PGSC0003DMG400007081 2.0kb downstream 2.0kb downstream 6035 true ST4.03ch07: 52189119-52195153 Solanum tuberosum
PGSC0003DMG400007081 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 52189119-52191118 Solanum tuberosum
PGSC0003DMG400007081 5.0kb upstream 5.0kb upstream 9035 true ST4.03ch07: 52191119-52200153 Solanum tuberosum
PGSC0003DMG400007081 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 52195154-52200153 Solanum tuberosum
PGSC0003DMG400007081 5.0kb downstream 5.0kb downstream 9035 true ST4.03ch07: 52186119-52195153 Solanum tuberosum
PGSC0003DMG400007081 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 52186119-52191118 Solanum tuberosum
PGSC0003DMG400007081 10.0kb upstream 10.0kb upstream 14035 true ST4.03ch07: 52191119-52205153 Solanum tuberosum
PGSC0003DMG400007081 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 52195154-52205153 Solanum tuberosum
PGSC0003DMG400007081 10.0kb downstream 10.0kb downstream 14035 true ST4.03ch07: 52181119-52195153 Solanum tuberosum
PGSC0003DMG400007081 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 52181119-52191118 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
121473068 5263 Asterids View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain