Gene : PGSC0003DMG400006139 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11451//PTHR11451:SF32 - TRNA SYNTHETASE-RELATED // THREONYL-TRNA SYNTHETASE / THREONINE--TRNA LIGASE-RELATED Genomic Order:  1602
Name:  ? PGSC0003DMG400006139 Secondary Identifier:  ? PAC:37434851
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400006139 0.5kb upstream 0.5kb upstream 7558 true ST4.03ch07: 44639004-44646561 Solanum tuberosum
PGSC0003DMG400006139 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 44639004-44639503 Solanum tuberosum
PGSC0003DMG400006139 0.5kb downstream 0.5kb downstream 7558 true ST4.03ch07: 44639504-44647061 Solanum tuberosum
PGSC0003DMG400006139 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 44646562-44647061 Solanum tuberosum
PGSC0003DMG400006139 1.0kb upstream 1.0kb upstream 8058 true ST4.03ch07: 44638504-44646561 Solanum tuberosum
PGSC0003DMG400006139 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 44638504-44639503 Solanum tuberosum
PGSC0003DMG400006139 1.0kb downstream 1.0kb downstream 8058 true ST4.03ch07: 44639504-44647561 Solanum tuberosum
PGSC0003DMG400006139 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 44646562-44647561 Solanum tuberosum
PGSC0003DMG400006139 2.0kb upstream 2.0kb upstream 9058 true ST4.03ch07: 44637504-44646561 Solanum tuberosum
PGSC0003DMG400006139 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 44637504-44639503 Solanum tuberosum
PGSC0003DMG400006139 2.0kb downstream 2.0kb downstream 9058 true ST4.03ch07: 44639504-44648561 Solanum tuberosum
PGSC0003DMG400006139 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 44646562-44648561 Solanum tuberosum
PGSC0003DMG400006139 5.0kb upstream 5.0kb upstream 12058 true ST4.03ch07: 44634504-44646561 Solanum tuberosum
PGSC0003DMG400006139 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 44634504-44639503 Solanum tuberosum
PGSC0003DMG400006139 5.0kb downstream 5.0kb downstream 12058 true ST4.03ch07: 44639504-44651561 Solanum tuberosum
PGSC0003DMG400006139 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 44646562-44651561 Solanum tuberosum
PGSC0003DMG400006139 10.0kb upstream 10.0kb upstream 17058 true ST4.03ch07: 44629504-44646561 Solanum tuberosum
PGSC0003DMG400006139 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 44629504-44639503 Solanum tuberosum
PGSC0003DMG400006139 10.0kb downstream 10.0kb downstream 17058 true ST4.03ch07: 44639504-44656561 Solanum tuberosum
PGSC0003DMG400006139 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 44646562-44656561 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472031 5263 Asterids View MSA
123739350 5271 Pentapetalae View MSA
122793542 5272 Eudicot View MSA
122044606 5273 Angiosperm View MSA
121343894 5274 Embryophyte View MSA
123425201 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain