Gene : PGSC0003DMG400012412 S. tuberosum v4.03
Defline:  (1 of 1) 4.2.1.109 - Methylthioribulose 1-phosphate dehydratase / 1-PMT-ribulose dehydratase Genomic Order:  2297
Name:  ? PGSC0003DMG400012412 Secondary Identifier:  ? PAC:37431223
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-4361 Solanum tuberosum pathologic  
Stuberosum PWY-7270 Solanum tuberosum pathologic  
Stuberosum PWY-7528 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400012412 0.5kb upstream 0.5kb upstream 6165 true ST4.03ch07: 53114519-53120683 Solanum tuberosum
PGSC0003DMG400012412 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 53114519-53115018 Solanum tuberosum
PGSC0003DMG400012412 0.5kb downstream 0.5kb downstream 6165 true ST4.03ch07: 53115019-53121183 Solanum tuberosum
PGSC0003DMG400012412 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 53120684-53121183 Solanum tuberosum
PGSC0003DMG400012412 1.0kb upstream 1.0kb upstream 6665 true ST4.03ch07: 53114019-53120683 Solanum tuberosum
PGSC0003DMG400012412 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 53114019-53115018 Solanum tuberosum
PGSC0003DMG400012412 1.0kb downstream 1.0kb downstream 6665 true ST4.03ch07: 53115019-53121683 Solanum tuberosum
PGSC0003DMG400012412 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 53120684-53121683 Solanum tuberosum
PGSC0003DMG400012412 2.0kb upstream 2.0kb upstream 7665 true ST4.03ch07: 53113019-53120683 Solanum tuberosum
PGSC0003DMG400012412 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 53113019-53115018 Solanum tuberosum
PGSC0003DMG400012412 2.0kb downstream 2.0kb downstream 7665 true ST4.03ch07: 53115019-53122683 Solanum tuberosum
PGSC0003DMG400012412 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 53120684-53122683 Solanum tuberosum
PGSC0003DMG400012412 5.0kb upstream 5.0kb upstream 10665 true ST4.03ch07: 53110019-53120683 Solanum tuberosum
PGSC0003DMG400012412 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 53110019-53115018 Solanum tuberosum
PGSC0003DMG400012412 5.0kb downstream 5.0kb downstream 10665 true ST4.03ch07: 53115019-53125683 Solanum tuberosum
PGSC0003DMG400012412 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 53120684-53125683 Solanum tuberosum
PGSC0003DMG400012412 10.0kb upstream 10.0kb upstream 15665 true ST4.03ch07: 53105019-53120683 Solanum tuberosum
PGSC0003DMG400012412 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 53105019-53115018 Solanum tuberosum
PGSC0003DMG400012412 10.0kb downstream 10.0kb downstream 15665 true ST4.03ch07: 53115019-53130683 Solanum tuberosum
PGSC0003DMG400012412 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 53120684-53130683 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466567 5263 Asterids View MSA
123736573 5271 Pentapetalae View MSA
122786615 5272 Eudicot View MSA
122042020 5273 Angiosperm View MSA
121345843 5274 Embryophyte View MSA
123425019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain