Gene : PGSC0003DMG400001438 S. tuberosum v4.03
Defline:  (1 of 1) PTHR21145:SF0 - CHORISMATE MUTASE Genomic Order:  2882
Name:  ? PGSC0003DMG400001438 Secondary Identifier:  ? PAC:37425838
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-3461 Solanum tuberosum pathologic  
Stuberosum PWY-3462 Solanum tuberosum pathologic  
Stuberosum PWY-3481 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400001438 0.5kb upstream 0.5kb upstream 6319 true ST4.03ch02: 45882595-45888913 Solanum tuberosum
PGSC0003DMG400001438 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 45882595-45883094 Solanum tuberosum
PGSC0003DMG400001438 0.5kb downstream 0.5kb downstream 6319 true ST4.03ch02: 45883095-45889413 Solanum tuberosum
PGSC0003DMG400001438 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 45888914-45889413 Solanum tuberosum
PGSC0003DMG400001438 1.0kb upstream 1.0kb upstream 6819 true ST4.03ch02: 45882095-45888913 Solanum tuberosum
PGSC0003DMG400001438 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 45882095-45883094 Solanum tuberosum
PGSC0003DMG400001438 1.0kb downstream 1.0kb downstream 6819 true ST4.03ch02: 45883095-45889913 Solanum tuberosum
PGSC0003DMG400001438 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 45888914-45889913 Solanum tuberosum
PGSC0003DMG400001438 2.0kb upstream 2.0kb upstream 7819 true ST4.03ch02: 45881095-45888913 Solanum tuberosum
PGSC0003DMG400001438 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 45881095-45883094 Solanum tuberosum
PGSC0003DMG400001438 2.0kb downstream 2.0kb downstream 7819 true ST4.03ch02: 45883095-45890913 Solanum tuberosum
PGSC0003DMG400001438 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 45888914-45890913 Solanum tuberosum
PGSC0003DMG400001438 5.0kb upstream 5.0kb upstream 10819 true ST4.03ch02: 45878095-45888913 Solanum tuberosum
PGSC0003DMG400001438 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 45878095-45883094 Solanum tuberosum
PGSC0003DMG400001438 5.0kb downstream 5.0kb downstream 10819 true ST4.03ch02: 45883095-45893913 Solanum tuberosum
PGSC0003DMG400001438 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 45888914-45893913 Solanum tuberosum
PGSC0003DMG400001438 10.0kb upstream 10.0kb upstream 15819 true ST4.03ch02: 45873095-45888913 Solanum tuberosum
PGSC0003DMG400001438 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 45873095-45883094 Solanum tuberosum
PGSC0003DMG400001438 10.0kb downstream 10.0kb downstream 15819 true ST4.03ch02: 45883095-45898913 Solanum tuberosum
PGSC0003DMG400001438 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 45888914-45898913 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
121480832 5263 Asterids View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain