Gene : PGSC0003DMG400001328 S. tuberosum v4.03
Defline:  (1 of 3) K00703 - starch synthase (E2.4.1.21, glgA) Genomic Order:  2917
Name:  ? PGSC0003DMG400001328 Secondary Identifier:  ? PAC:37424811
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum GLYCOGENSYNTH-PWY Solanum tuberosum pathologic  
Stuberosum PWY-622 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400001328 0.5kb upstream 0.5kb upstream 6557 true ST4.03ch02: 46190340-46196896 Solanum tuberosum
PGSC0003DMG400001328 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 46196397-46196896 Solanum tuberosum
PGSC0003DMG400001328 0.5kb downstream 0.5kb downstream 6557 true ST4.03ch02: 46189840-46196396 Solanum tuberosum
PGSC0003DMG400001328 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 46189840-46190339 Solanum tuberosum
PGSC0003DMG400001328 1.0kb upstream 1.0kb upstream 7057 true ST4.03ch02: 46190340-46197396 Solanum tuberosum
PGSC0003DMG400001328 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 46196397-46197396 Solanum tuberosum
PGSC0003DMG400001328 1.0kb downstream 1.0kb downstream 7057 true ST4.03ch02: 46189340-46196396 Solanum tuberosum
PGSC0003DMG400001328 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 46189340-46190339 Solanum tuberosum
PGSC0003DMG400001328 2.0kb upstream 2.0kb upstream 8057 true ST4.03ch02: 46190340-46198396 Solanum tuberosum
PGSC0003DMG400001328 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 46196397-46198396 Solanum tuberosum
PGSC0003DMG400001328 2.0kb downstream 2.0kb downstream 8057 true ST4.03ch02: 46188340-46196396 Solanum tuberosum
PGSC0003DMG400001328 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 46188340-46190339 Solanum tuberosum
PGSC0003DMG400001328 5.0kb upstream 5.0kb upstream 11057 true ST4.03ch02: 46190340-46201396 Solanum tuberosum
PGSC0003DMG400001328 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 46196397-46201396 Solanum tuberosum
PGSC0003DMG400001328 5.0kb downstream 5.0kb downstream 11057 true ST4.03ch02: 46185340-46196396 Solanum tuberosum
PGSC0003DMG400001328 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 46185340-46190339 Solanum tuberosum
PGSC0003DMG400001328 10.0kb upstream 10.0kb upstream 16057 true ST4.03ch02: 46190340-46206396 Solanum tuberosum
PGSC0003DMG400001328 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 46196397-46206396 Solanum tuberosum
PGSC0003DMG400001328 10.0kb downstream 10.0kb downstream 16057 true ST4.03ch02: 46180340-46196396 Solanum tuberosum
PGSC0003DMG400001328 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 46180340-46190339 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472721 5263 Asterids View MSA
123744003 5271 Pentapetalae View MSA
122787814 5272 Eudicot View MSA
122042262 5273 Angiosperm View MSA
121347324 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain