Gene : PGSC0003DMG400016505 S. tuberosum v4.03

Defline:  (1 of 1) K11273 - chromosome transmission fidelity protein 1 [EC:3.6.4.13] (DDX11, CHL1, CTF1) Genomic Order:  2176
Name:  ? PGSC0003DMG400016505 Secondary Identifier:  ? PAC:37451267

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400016505 0.5kb upstream 0.5kb upstream 5839 true ST4.03ch06: 49314753-49320591 Solanum tuberosum
PGSC0003DMG400016505 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 49314753-49315252 Solanum tuberosum
PGSC0003DMG400016505 0.5kb downstream 0.5kb downstream 5839 true ST4.03ch06: 49315253-49321091 Solanum tuberosum
PGSC0003DMG400016505 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 49320592-49321091 Solanum tuberosum
PGSC0003DMG400016505 1.0kb upstream 1.0kb upstream 6339 true ST4.03ch06: 49314253-49320591 Solanum tuberosum
PGSC0003DMG400016505 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 49314253-49315252 Solanum tuberosum
PGSC0003DMG400016505 1.0kb downstream 1.0kb downstream 6339 true ST4.03ch06: 49315253-49321591 Solanum tuberosum
PGSC0003DMG400016505 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 49320592-49321591 Solanum tuberosum
PGSC0003DMG400016505 2.0kb upstream 2.0kb upstream 7339 true ST4.03ch06: 49313253-49320591 Solanum tuberosum
PGSC0003DMG400016505 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 49313253-49315252 Solanum tuberosum
PGSC0003DMG400016505 2.0kb downstream 2.0kb downstream 7339 true ST4.03ch06: 49315253-49322591 Solanum tuberosum
PGSC0003DMG400016505 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 49320592-49322591 Solanum tuberosum
PGSC0003DMG400016505 5.0kb upstream 5.0kb upstream 10339 true ST4.03ch06: 49310253-49320591 Solanum tuberosum
PGSC0003DMG400016505 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 49310253-49315252 Solanum tuberosum
PGSC0003DMG400016505 5.0kb downstream 5.0kb downstream 10339 true ST4.03ch06: 49315253-49325591 Solanum tuberosum
PGSC0003DMG400016505 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 49320592-49325591 Solanum tuberosum
PGSC0003DMG400016505 10.0kb upstream 10.0kb upstream 15339 true ST4.03ch06: 49305253-49320591 Solanum tuberosum
PGSC0003DMG400016505 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 49305253-49315252 Solanum tuberosum
PGSC0003DMG400016505 10.0kb downstream 10.0kb downstream 15339 true ST4.03ch06: 49315253-49330591 Solanum tuberosum
PGSC0003DMG400016505 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 49320592-49330591 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470375 5263 Asterids View MSA
123739060 5271 Pentapetalae View MSA
122791731 5272 Eudicot View MSA
122044733 5273 Angiosperm View MSA
121346490 5274 Embryophyte View MSA
123426390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain