Gene : PGSC0003DMG400028929 S. tuberosum v4.03

Defline:  (1 of 5) 6.2.1.12//6.2.1.34 - 4-coumarate--CoA ligase / 4-coumaryl-CoA synthetase // Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase Genomic Order:  2298
Name:  ? PGSC0003DMG400028929 Secondary Identifier:  ? PAC:37450398

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-1121 Solanum tuberosum pathologic  
Stuberosum PWY1F-FLAVSYN Solanum tuberosum pathologic  
Stuberosum PWY-361 Solanum tuberosum pathologic  
Stuberosum PWY-6435 Solanum tuberosum pathologic  
Stuberosum PWY-6673 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400028929 0.5kb upstream 0.5kb upstream 4228 true ST4.03ch06: 50341799-50346026 Solanum tuberosum
PGSC0003DMG400028929 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 50345527-50346026 Solanum tuberosum
PGSC0003DMG400028929 0.5kb downstream 0.5kb downstream 4228 true ST4.03ch06: 50341299-50345526 Solanum tuberosum
PGSC0003DMG400028929 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 50341299-50341798 Solanum tuberosum
PGSC0003DMG400028929 1.0kb upstream 1.0kb upstream 4728 true ST4.03ch06: 50341799-50346526 Solanum tuberosum
PGSC0003DMG400028929 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 50345527-50346526 Solanum tuberosum
PGSC0003DMG400028929 1.0kb downstream 1.0kb downstream 4728 true ST4.03ch06: 50340799-50345526 Solanum tuberosum
PGSC0003DMG400028929 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 50340799-50341798 Solanum tuberosum
PGSC0003DMG400028929 2.0kb upstream 2.0kb upstream 5728 true ST4.03ch06: 50341799-50347526 Solanum tuberosum
PGSC0003DMG400028929 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 50345527-50347526 Solanum tuberosum
PGSC0003DMG400028929 2.0kb downstream 2.0kb downstream 5728 true ST4.03ch06: 50339799-50345526 Solanum tuberosum
PGSC0003DMG400028929 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 50339799-50341798 Solanum tuberosum
PGSC0003DMG400028929 5.0kb upstream 5.0kb upstream 8728 true ST4.03ch06: 50341799-50350526 Solanum tuberosum
PGSC0003DMG400028929 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 50345527-50350526 Solanum tuberosum
PGSC0003DMG400028929 5.0kb downstream 5.0kb downstream 8728 true ST4.03ch06: 50336799-50345526 Solanum tuberosum
PGSC0003DMG400028929 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 50336799-50341798 Solanum tuberosum
PGSC0003DMG400028929 10.0kb upstream 10.0kb upstream 13728 true ST4.03ch06: 50341799-50355526 Solanum tuberosum
PGSC0003DMG400028929 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 50345527-50355526 Solanum tuberosum
PGSC0003DMG400028929 10.0kb downstream 10.0kb downstream 13728 true ST4.03ch06: 50331799-50345526 Solanum tuberosum
PGSC0003DMG400028929 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 50331799-50341798 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479241 5263 Asterids View MSA
123741286 5271 Pentapetalae View MSA
122790673 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain