Gene : PGSC0003DMG400026978 S. tuberosum v4.03
Defline:  (1 of 5) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  2518
Name:  ? PGSC0003DMG400026978 Secondary Identifier:  ? PAC:37450196
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ANAEROFRUCAT-PWY Solanum tuberosum pathologic  
Stuberosum ANAGLYCOLYSIS-PWY Solanum tuberosum pathologic  
Stuberosum GLUCONEO-PWY Solanum tuberosum pathologic  
Stuberosum PWY-1042 Solanum tuberosum pathologic  
Stuberosum PWY-5464 Solanum tuberosum pathologic  
Stuberosum SUCSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400026978 0.5kb upstream 0.5kb upstream 4056 true ST4.03ch06: 52786696-52790751 Solanum tuberosum
PGSC0003DMG400026978 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 52790252-52790751 Solanum tuberosum
PGSC0003DMG400026978 0.5kb downstream 0.5kb downstream 4056 true ST4.03ch06: 52786196-52790251 Solanum tuberosum
PGSC0003DMG400026978 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 52786196-52786695 Solanum tuberosum
PGSC0003DMG400026978 1.0kb upstream 1.0kb upstream 4556 true ST4.03ch06: 52786696-52791251 Solanum tuberosum
PGSC0003DMG400026978 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 52790252-52791251 Solanum tuberosum
PGSC0003DMG400026978 1.0kb downstream 1.0kb downstream 4556 true ST4.03ch06: 52785696-52790251 Solanum tuberosum
PGSC0003DMG400026978 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 52785696-52786695 Solanum tuberosum
PGSC0003DMG400026978 2.0kb upstream 2.0kb upstream 5556 true ST4.03ch06: 52786696-52792251 Solanum tuberosum
PGSC0003DMG400026978 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 52790252-52792251 Solanum tuberosum
PGSC0003DMG400026978 2.0kb downstream 2.0kb downstream 5556 true ST4.03ch06: 52784696-52790251 Solanum tuberosum
PGSC0003DMG400026978 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 52784696-52786695 Solanum tuberosum
PGSC0003DMG400026978 5.0kb upstream 5.0kb upstream 8556 true ST4.03ch06: 52786696-52795251 Solanum tuberosum
PGSC0003DMG400026978 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 52790252-52795251 Solanum tuberosum
PGSC0003DMG400026978 5.0kb downstream 5.0kb downstream 8556 true ST4.03ch06: 52781696-52790251 Solanum tuberosum
PGSC0003DMG400026978 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 52781696-52786695 Solanum tuberosum
PGSC0003DMG400026978 10.0kb upstream 10.0kb upstream 13556 true ST4.03ch06: 52786696-52800251 Solanum tuberosum
PGSC0003DMG400026978 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 52790252-52800251 Solanum tuberosum
PGSC0003DMG400026978 10.0kb downstream 10.0kb downstream 13556 true ST4.03ch06: 52776696-52790251 Solanum tuberosum
PGSC0003DMG400026978 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 52776696-52786695 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121385128 5263 Asterids View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain