Gene : PGSC0003DMG400027011 S. tuberosum v4.03
Defline:  (1 of 2) PTHR11685//PTHR11685:SF135 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ARI10-RELATED Genomic Order:  2664
Name:  ? PGSC0003DMG400027011 Secondary Identifier:  ? PAC:37449775
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-7511 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400027011 0.5kb upstream 0.5kb upstream 9135 true ST4.03ch06: 53858148-53867282 Solanum tuberosum
PGSC0003DMG400027011 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 53858148-53858647 Solanum tuberosum
PGSC0003DMG400027011 0.5kb downstream 0.5kb downstream 9135 true ST4.03ch06: 53858648-53867782 Solanum tuberosum
PGSC0003DMG400027011 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 53867283-53867782 Solanum tuberosum
PGSC0003DMG400027011 1.0kb upstream 1.0kb upstream 9635 true ST4.03ch06: 53857648-53867282 Solanum tuberosum
PGSC0003DMG400027011 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 53857648-53858647 Solanum tuberosum
PGSC0003DMG400027011 1.0kb downstream 1.0kb downstream 9635 true ST4.03ch06: 53858648-53868282 Solanum tuberosum
PGSC0003DMG400027011 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 53867283-53868282 Solanum tuberosum
PGSC0003DMG400027011 2.0kb upstream 2.0kb upstream 10635 true ST4.03ch06: 53856648-53867282 Solanum tuberosum
PGSC0003DMG400027011 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 53856648-53858647 Solanum tuberosum
PGSC0003DMG400027011 2.0kb downstream 2.0kb downstream 10635 true ST4.03ch06: 53858648-53869282 Solanum tuberosum
PGSC0003DMG400027011 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 53867283-53869282 Solanum tuberosum
PGSC0003DMG400027011 5.0kb upstream 5.0kb upstream 13635 true ST4.03ch06: 53853648-53867282 Solanum tuberosum
PGSC0003DMG400027011 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 53853648-53858647 Solanum tuberosum
PGSC0003DMG400027011 5.0kb downstream 5.0kb downstream 13635 true ST4.03ch06: 53858648-53872282 Solanum tuberosum
PGSC0003DMG400027011 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 53867283-53872282 Solanum tuberosum
PGSC0003DMG400027011 10.0kb upstream 10.0kb upstream 18635 true ST4.03ch06: 53848648-53867282 Solanum tuberosum
PGSC0003DMG400027011 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 53848648-53858647 Solanum tuberosum
PGSC0003DMG400027011 10.0kb downstream 10.0kb downstream 18635 true ST4.03ch06: 53858648-53877282 Solanum tuberosum
PGSC0003DMG400027011 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 53867283-53877282 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476532 5263 Asterids View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain